| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4470 |
|---|
| Symbol | |
|---|
| ID | 4596989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4725228 |
|---|
| End bp | 4725716 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639779081 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_925654 |
|---|
| Protein GI | 119718689 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCG CCCGACTGGC CGGGCTGATC CGCCGGACCG GGCGGATCGC CGAGCCGGCG
CCGGCGCTCC CCGACGGCCA CCCCGGCCGT CCGACCGAGC TGGCCGGCAG CGTGCAGATC
CGGCACGTCG ACGCCGGGTC GTGCAACGGC TGCGAGATCG AGGTCGGCGG GGCCTTCGGC
CCGGTCTACG ACGCGGAGCG GTACGGCGCA CGCCTGGTCG CCTCGCCACG ACATGCCGAC
GTCGTCCTGG TCACCGGCGT GGTGACGCAC AACATGCTCG AGCCGCTGCG CCGTACCGTC
GAGGCCACGC CGCGGCCGCG GCTCGTGCTG GCCGTGGGCG ACTGCGCCCG CAACTGCGGC
GCCTTCAAGG GCGGGTACGG CGTCGCCGGC GCCGTGCACG ACGCGGTCGA CGTCGACCTC
GAGGTCCCGG GCTGCCCGCC CGAGCCGGCC GCCATCGTCG ACGCGCTGCG CCGGGTGACC
GGACGGTGA
|
|---|
| Protein sequence | MSLARLAGLI RRTGRIAEPA PALPDGHPGR PTELAGSVQI RHVDAGSCNG CEIEVGGAFG
PVYDAERYGA RLVASPRHAD VVLVTGVVTH NMLEPLRRTV EATPRPRLVL AVGDCARNCG
AFKGGYGVAG AVHDAVDVDL EVPGCPPEPA AIVDALRRVT GR
|
|---|
| |