Gene Noca_4469 details

Gene Information

• Locus tag: Noca_4469
• ID: 4596988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 4723214
• End bp: 4725208
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639779080
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_925653
• Protein GI: 119718688
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGGTG TCGAGCTGGG CATGACCGCG CAGGTCGTGC TCGCGGCCGC AGCCGTCGCG 
GCCGCGGTGC TGGCCCCGCC CCGGCTGCGC AACCTGGTGG CGGGGACACT TGCCGCCGCC 
GTCGGCGCGG CCGGCGTGGT GACCGGCGCC GCCGCGCTCA CCGACCACTC CGGCTCGCTT 
GACCTGTCGA CGGCCCTCCC CCTCACGGGC GTAGCCCTCG ACCCCACGCC GCTCGGCGGC 
TTCGTGATGC TGGTCGCGGG AGCGGTCGGC GCTGTGGCCG CCGTCTTCGC GATCGGCTAC 
GCACACGGAC CGGCCGCCTC GCGCACCTCC TGGGCGGCGC TCCCCGCGTT CCTGGTCTCG 
ATGCAGCTGG TGCCCGCGGC CGCAGATGCC GTCTCGTTCC TGCTGATGTG GGAGCTGATG 
GCGCTCGCCT CGGCGGTGCT GGTCCTCACC GAGCACCGGG ACCGAGAGGA AGTGCGGTCC 
GCGGCACTCT GGTACGCCGC GATGACCCAC CTGAGCTTCG GGCTGCTGCT GCTGGGCTTC 
ACCGTGCTCG TGGAGGAGGG CGGCGGCACC GGCTTCGACG CCATGAGCGC CGTCGACCCC 
ACGTCCCTCC AGGCGTCGAT CGCCTTCGTG CTGCTGATCG CGGGTTTCGC GACCAAGGCG 
GGCGCGGTCC CGTTCCACGT CTGGTTGCCC CGGGCCCACC CGGCCGCGCC GAGCCACGTC 
TCCGCGGTGA TGAGCGCGGC GATGGTCAAG ATGGGGGTGT ACGGCGCGCT GCTGGTCGCG 
CTCCGCCTGC TGCCGGGCGG CCCCACCTGG TGGGGGTTCG TCGTGGTGGC ACTCGGCGCG 
GTGTCCGCGA CGTACGGCAT CCTCCAGGCC TCGGTCACCA GCGACCTCAA GCGCCTGCTC 
GCGTACTCGA CGACCGAGAA CGTCGGGCTG ATGTTCCTCG CGCTCGGGAC GGCGATGCTC 
CTGCGCTCCC ACGATGTCTC GGCCCCGGCG GACGCGGCGC TCGTCGCCTG CCTGCTGCTG 
CTCACCAGTC ACGCCGCCTT CAAGACCGCA CTGTTCCTCG GCGCGGGGGC CGTGCTGCAC 
GCCACCGGTG AGCGGGACCT GGACCGAATG GGGGGTCTCG CGGCCCGGAT GCCGGTCACC 
AACGTGGCGT TCGCTCTCGG CGCTCTGGGC GCGGCGGCGC TCCCGCTGAG CGTGGGCTTC 
GTGGCCGAGT GGACGCTGCT CCAGTCGCTG ATCCACGGCG CCCGTCCGGA CGATCGACTG 
GTCGCGGCGA TGATGCCGAT CTCGGTCGCC GTCGTCGCCC TCACGGCGGG GCTGGCGCTG 
CTCACGTTCG TCAAGGCCTA CGGGATCGCC TTCCTGGCCC GGCCCCGCTC GTCCGGTGCC 
GCCGAGGCCC GGGAGGCGAC ACCCGGCATG CGCACGGCGA TGCTCGTGGC CGCGGTCGCC 
GTCGTCGGCC TCGGCCTGGT TCCTGGCCCG CTCGCCGACC TCGCCGGGCG CGCCGCGGGT 
GTCGCCGATC CCGGGTCAGA GGTGGCCGTC GACCTGCCCG GGATCGCGGG CGGCGTGCTC 
GATCCCGTCG CCGTGTCCGT CCTGGCGGTG CTGCTCGCGG CGCCGGTCGG CGTGGTCGCG 
CTGGCCGCGG CACGGCGCCG CCGGCGGCGC CGGGTGGACC TCGCCTGGGG GTGCGGGGGC 
GCGCGGGTCA GCCCGCGGAT GCAGTACACC GCGACGTCGT ACGCCGAACC CCTGGCGCGC 
GTGTTCGACG ACGCCGTCCG GCCGGAGCGC GACGTGGTGG TCACCCACTA CAGCGAGTCC 
CGCTACCTGG TCGAGCGCGT GCAGTTCCGC CAGCGGCTCG ACGAGGTCGT CGAGACCCGG 
CTCTACCAGC CCGTGCTGCG CGTCGGCGAC CGTGTCGGGG CCGCGGCGCG CCGGCTGCAG 
AACGGCAGCA TCCATCGCTA CCTGGGCTAC TCCTTCGCCG CCCTGGTCGC CGTGCTCGTG 
GTGGTCGCGC TGTGA 

 

Protein sequence

MTGVELGMTA QVVLAAAAVA AAVLAPPRLR NLVAGTLAAA VGAAGVVTGA AALTDHSGSL 
DLSTALPLTG VALDPTPLGG FVMLVAGAVG AVAAVFAIGY AHGPAASRTS WAALPAFLVS 
MQLVPAAADA VSFLLMWELM ALASAVLVLT EHRDREEVRS AALWYAAMTH LSFGLLLLGF 
TVLVEEGGGT GFDAMSAVDP TSLQASIAFV LLIAGFATKA GAVPFHVWLP RAHPAAPSHV 
SAVMSAAMVK MGVYGALLVA LRLLPGGPTW WGFVVVALGA VSATYGILQA SVTSDLKRLL 
AYSTTENVGL MFLALGTAML LRSHDVSAPA DAALVACLLL LTSHAAFKTA LFLGAGAVLH 
ATGERDLDRM GGLAARMPVT NVAFALGALG AAALPLSVGF VAEWTLLQSL IHGARPDDRL 
VAAMMPISVA VVALTAGLAL LTFVKAYGIA FLARPRSSGA AEAREATPGM RTAMLVAAVA 
VVGLGLVPGP LADLAGRAAG VADPGSEVAV DLPGIAGGVL DPVAVSVLAV LLAAPVGVVA 
LAAARRRRRR RVDLAWGCGG ARVSPRMQYT ATSYAEPLAR VFDDAVRPER DVVVTHYSES 
RYLVERVQFR QRLDEVVETR LYQPVLRVGD RVGAAARRLQ NGSIHRYLGY SFAALVAVLV 
VVAL