Gene Noca_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4345 
Symbol 
ID4596863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4593998 
End bp4594894 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content74% 
IMG OID639778955 
Productdiacylglycerol kinase, catalytic region 
Protein accessionYP_925529 
Protein GI119718564 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCACCA ACAGTGAGGC CGGCACCTCC GACGAGGAGT CGCTGGCGGC CGCGCTCGCC 
GTGCTCCGCG AGCGGGCCTC GGTCGAGGTG GCGGCCACGG CCAACCCCGG TGAGCTCGAC
GGCGTGCTGC ACCGCGCGGG CTCGCGCCGG ATCGTGGTCG CGGGCGGCGA CGGCAGCCTG
CACGCGGTGA TCTCCGCGCT GCACCGCCGC CAGGAGCTGG GGGGCGCCAC CCTCGGGCTG
CTCCCGCTCG GCACCGGCAA CGACTTCGCG CGCGGCACCG GGATCCCGCT CGACATCGAG
GACGCCGCCC GGGTCGTGCT GCGCGACCGG CCGCGGCCGA TGGACCTCGT CGTCGACGAG
GTCGGCGAGA TCGTCGTCAA CAGCGTGCAC GTCGGGGCGG GCGCCGAGGC CAGCCGCAAG
GGTGCGTCCT GGAAGAACCG GCTCGGGTCG ATCGGCATCG GCAGGCTCAA CCTGGGCAGG
CTCGGCTACC CGATCGGGGC GGCCCTGACC GCGATCGACC CGCCCAGTGT GCGGGTCCGG
GTCGAGGTCG ACGGCGAGCC CATCTGCGAC CTGAACGACC CGGTGCTGAT GGTGGCGATC
GGCAACGGCC CGTCCGTCGG CGGAGGCACC CACCTGACCC CCGAGGCCAG CCCGCTCGAC
GGGAAGGTCG ACGTGATGAT CTCGCGCGCC GTCGGGCCCG TGTCCCGACT GCTGTACGGC
GCGCGGCTGG GCCTGGGCAC CCACCACCGG CAGGACGACA GCACCTACCT GCGCGGCAGC
ACCGTCTCGG TCTCCGGCGG GCCGTTCTGG TGCAGCGCCG ACGGCGAGGT CTACGGTCCC
GAGCGGCAGC GCACCTGGCG GGTCGAGCCG GGCGCGTACT CGATGCTGCT GCCCTGA
 
Protein sequence
MITNSEAGTS DEESLAAALA VLRERASVEV AATANPGELD GVLHRAGSRR IVVAGGDGSL 
HAVISALHRR QELGGATLGL LPLGTGNDFA RGTGIPLDIE DAARVVLRDR PRPMDLVVDE
VGEIVVNSVH VGAGAEASRK GASWKNRLGS IGIGRLNLGR LGYPIGAALT AIDPPSVRVR
VEVDGEPICD LNDPVLMVAI GNGPSVGGGT HLTPEASPLD GKVDVMISRA VGPVSRLLYG
ARLGLGTHHR QDDSTYLRGS TVSVSGGPFW CSADGEVYGP ERQRTWRVEP GAYSMLLP