| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4328 |
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| Symbol | |
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| ID | 4596846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4577888 |
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| End bp | 4579336 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639778938 |
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| Product | major facilitator transporter |
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| Protein accession | YP_925512 |
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| Protein GI | 119718547 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.192705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGTG ACACCCTCCC CACCGACCTC CCGCCGAACG CGGGACGGGC GGCCACCGGC
GTCGCGATCG TGCTGGTCGC CCAGCTCATG CTCGTCCTGG ACGCGACGGT CGTGAACGTC
GCGCTCCCCC GCATCGACGC CGACCTGGGC TTCGGCCCGG CGTCGCTGTC GTGGATCCTC
AACGCCTACA CGCTCGCCTT CGGCGGCCTG CTCCTCCTGG GCGGCCGGCT CGGCGACGTC
TTCGGTCGGC TCAAGGTCTT CGAGGCCGGG CTCGCCGTGT TCACCCTCGG CTCAGCGCTC
GGCGGCCTCG CCCAGACCCC CGGGCAGCTG GTCGCCGCGC GCACCCTCCA GGGCGTCGGC
GCCGCGCTCG CCGCGCCGAG CGTCCTGGCC CTGCTCACCA CGAGCGCTCC CGACGAGGCC
GCGCGCAACC GCGCGTTCGC GCTCTTCGGC GCGGTCTCCT CCGGCGGCGC CTCGATCGGC
CTGCTGCTGG GCGGCCTGCT CACCGACGTC GGGTCGTGGC GCTGGACGCT GTTCATCAAC
GTCCCGCTCG GGGTCGCCGT GCTCCTGCTG GCGCCGCGGT ACGTCGACGG GACCCGCCGC
CGGCCCGGCC GCTTCGACCT CGTCGGCGCG TTCGCCGCGA CCTTCGGCGC GGTGTCCCTC
GTCTGGGCGC TGATCGGCAC CCCCGAGCAC GGCTGGGCCG CGCCGCGCAC CCTCGGCGGC
TTCGCGATCG GCGTCGCACT CCTCGCCCTG CTGGCCCGCA CCGAGGTGCG GCACCCGCAC
CCGATGGTGC AGCCCGCCCT GCTGCGCAGC CGGCCCCGGG TCGCCGCGCT CGGCGTGATG
GCGCTGATGA TCGGCGCGAA CCTGTCGATG TTCTTCCTGG TCGTGCAGTA CGTCCAGGGC
GTGCTCGGCT TCGGCCCGCT GATGGCGGGC GTCGCGTTCC TGCCGTTCAG CCTCGGCATC
TTCGCGATCT CGCGCGTCAC GCCCGAGCTG CTGGCCCGGT TCGGTGCCCG GGCGATGGTC
CTGGTCGGCA GCGCCGCGCT GGCCGCCGGC TACACGTGGC TGAGCACGAT CGGCACCACC
GACTCCTACC CCGCGGCGGT GTTCGGGCCG ATGGTGATCG CCGGTCTCGC CACCGGGCTG
GTCTTCATGC CGGTGACCGC GACGGTGCTC GGCGGGGTCG AGCCCGAGCA CGCCGGGTCC
GCCTCCGGCC TGCTGCAGAC CACGCAGCAG CTCGGCAGCG CCGTCGGCGT GGCCGCGATC
GTGTCGGTCT ACGCCGCGGG CGCCGTGCCC GGCGAGCTGG TCCCGGGCCT GCAGCCGGCG
TTCCTCACCT CGGCGGCGTT CGCCGCGCTG GCGACGGTCG TCGGCCTGGT CGGGCTGCCC
GCCCGGGCGC CGCGGCCGGT CGAGATCGCC GACGAGGAGG TCGAGGCGGT GGCCGCCGAG
GCGGCTTGA
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| Protein sequence | MSRDTLPTDL PPNAGRAATG VAIVLVAQLM LVLDATVVNV ALPRIDADLG FGPASLSWIL
NAYTLAFGGL LLLGGRLGDV FGRLKVFEAG LAVFTLGSAL GGLAQTPGQL VAARTLQGVG
AALAAPSVLA LLTTSAPDEA ARNRAFALFG AVSSGGASIG LLLGGLLTDV GSWRWTLFIN
VPLGVAVLLL APRYVDGTRR RPGRFDLVGA FAATFGAVSL VWALIGTPEH GWAAPRTLGG
FAIGVALLAL LARTEVRHPH PMVQPALLRS RPRVAALGVM ALMIGANLSM FFLVVQYVQG
VLGFGPLMAG VAFLPFSLGI FAISRVTPEL LARFGARAMV LVGSAALAAG YTWLSTIGTT
DSYPAAVFGP MVIAGLATGL VFMPVTATVL GGVEPEHAGS ASGLLQTTQQ LGSAVGVAAI
VSVYAAGAVP GELVPGLQPA FLTSAAFAAL ATVVGLVGLP ARAPRPVEIA DEEVEAVAAE
AA
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