Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4316 |
Symbol | |
ID | 4596834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4563229 |
End bp | 4564773 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639778926 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_925500 |
Protein GI | 119718535 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCTACC AAAGCAGCCC CCGCAAGGGA GGCGACGGCA GGCTGACCGC GGCGCTCGAC CCCCAGGACC AGGGCCCCCA GGACGCCTGC GGCGTCTTCG GCGTCTGGGC ACCCGGCGAG GACGTCGCCA AGCTCACCTA CTTCGGCCTG TACGCGCTCC AGCACCGCGG CCAGGAGTCG GCGGGCATCG CGGTCAGCAA CGGCCGCCAG ATCCTGGTCT ACAAGGACAT GGGCCTGGTC TCCCAGGTCT TCGACGAGAC CACCCTGGCC TCGCTCAAGG GGCACCTGGC CATCGGCCAC AGCCGCTACT CCACCACCGG GGCGAGCACC TGGCAGAACG CGCAGCCGAC CTTCCGGCCC ACCGCGGACG GCTCGATCGC GCTCGGCCAC AACGGCAACC TGATCAACAC CCACGACCTG GCCCGGATGG TGGTCGACCT GCCCGGCCCC GGCGACGAGC TCGAGCTGCA CACCCGCCCG GCCGAGACGT CGACCAACGA CACCGGCCTG GTGACCGCGC TCCTGGCGCA CCACCCCGAC ACGTCGCTGG AGCAGCGCGC GCTGGAGGTG CTGCCCCAGC TGAAGGGCGC CTTCTGCTTC GTCTGGATGA ACGAGGACAC CCTGTACGCC GCCCGCGACG CCCAGGGCAT CCGGCCGCTC GTGCTCGGCC GGCTCGAGCG CGGCTGGGTG GTCGCCAGCG AGGACGCCGC ACTGGCCACC ATCGGCGCGA GCGTGGTCCG CGAGGTCGAG CCCGGCGAGA TGATCGTCAT CGACGAGTTC GGCCTGCGCT CACACAAGTT CGCCGACCCG GCGCCGAAGG GCTGCGTCTT CGAGTACGTC TACCTGGCCC GGCCGGACGC CACGATCAGC GGCCGCAGCG TCCACGAGTC CCGGGTCGAG ATGGGCCGCC AGCTCGCCCG CGAGTACCCC GTCGACGCCG ACCTGGTGAT CCCGGTCCCC GAGTCCGGCA CCCCCGCGGC CGCCGGCTAC GCCGAGGAGA GCGGCATCCC GTTCGGCCAG GGTTTCGTGA AGAACGCGTA CGTCGGGCGC ACCTTCATCC AGCCCAGCCA GACGCTGCGC CAGCTCGGCA TCCGCCTCAA GCTCAACGCC CTCGAGCACA TGATCCGCGG CAAGCGGATC GTCGTCGTCG ACGACTCGAT CGTGCGCGGC AACACCCAGC GCGCCCAGGT CCGGATGCTC CGCGAGGCCG GGGCCCGCGA GGTCCACGTG CGGATCTCCA GCCCGCCGGT GAAGTGGCCG TGCTTCTACG GCATCGACTT CGCGACCCGC GCCGAGCTGA TCGCCAACGG CCTGACCCCC GAGGAGATCG CGGCCAGCAT CGGCGCCGAC AGCCTCGGCT ACATCTCCCT CGACGGCATG ATCGACGCGA CCGGCCTGGA GCCGGACCGG CTCTGCCGGG CCTGCTTCAC CGGCGAGTAC CCGATCCCGC TCCCCGACGA GAGCCTGCTC GGCAAGCACC TGCTCGAGTC CTCGATCCAG GCGCCGTCGT ACGGCAAGGC GCTGCCCGTC CTCAACAACC CGTAG
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Protein sequence | MPYQSSPRKG GDGRLTAALD PQDQGPQDAC GVFGVWAPGE DVAKLTYFGL YALQHRGQES AGIAVSNGRQ ILVYKDMGLV SQVFDETTLA SLKGHLAIGH SRYSTTGAST WQNAQPTFRP TADGSIALGH NGNLINTHDL ARMVVDLPGP GDELELHTRP AETSTNDTGL VTALLAHHPD TSLEQRALEV LPQLKGAFCF VWMNEDTLYA ARDAQGIRPL VLGRLERGWV VASEDAALAT IGASVVREVE PGEMIVIDEF GLRSHKFADP APKGCVFEYV YLARPDATIS GRSVHESRVE MGRQLAREYP VDADLVIPVP ESGTPAAAGY AEESGIPFGQ GFVKNAYVGR TFIQPSQTLR QLGIRLKLNA LEHMIRGKRI VVVDDSIVRG NTQRAQVRML REAGAREVHV RISSPPVKWP CFYGIDFATR AELIANGLTP EEIAASIGAD SLGYISLDGM IDATGLEPDR LCRACFTGEY PIPLPDESLL GKHLLESSIQ APSYGKALPV LNNP
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