| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4071 |
|---|
| Symbol | |
|---|
| ID | 4596585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4297203 |
|---|
| End bp | 4298351 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639778677 |
|---|
| Product | thiolase |
|---|
| Protein accession | YP_925255 |
|---|
| Protein GI | 119718290 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.197027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG GCGCGGCGAT CGTCGGGGCC GCGGAGTCCG ACCTGGGCGT CACCGGCAAG
TCCATCCTGA CCCTGCAGGC CCAGGCCGTG TCCCGGGCAC TGGCCGACGC CGGCCTCACC
GTCGCCGACG TCGACGGGAT CGCCACCACC GGCATCTCCC GCTTCTCCGC CACCCAGCTC
GCCGACTACC TCAGTCTCCG GCCCACCTGG ACCGACTCCA CCTTCGCGGG AGGGTCGGCG
TTCGAGATGT ACGTCGCCCG GGCCGCGCAG GCGATCGCGG CCGGGCAAGC GACCACGGTC
GTCATCTCGT TCGCATCCAA CCAGCGGTCC GCGAGGTCCC GGAGGCTGGG CGGGGTGCAC
GAGCCCTGGA TCCCCGAGGC CCAGTTCGAG GAGCCGTACG ACCCGCTCTA TCCCGTGTCG
TACTACGCCA TGGCCGCCCA GCAGTACTTC CATCGGTTCG GCGGCACCCG CGAGCAGCTC
GCGGAGATCG CGGTCGCGGC ACGTGACTGG GCGCTGCTGA ACCCGCGGGC GTTCCGCTAC
GGCGCCGGCC GGCTCTCCGT CGAGGACGTG ACCGGGTCGA CGATGATCTC CAGCCCCCTC
GGCGTCGCCG ACTGCTGCCT GGTGACCGAT GGCGGCGGTG CCGTCGTCCT GACCTCGCTG
GAGCGCGCCC GGGACCTGGC CCGACCTCCC GTCGAGGTCC TCGGGTACGG CGAGCGGACC
ACCAACACCT CGTTCACCAC TGTCCGCGAC CTGACCGCCC CCGGCGCAGC GGAGTCGGCG
GCGGACGCGT ACGCGCGAGC CGGGATCACC GCGGCCGACG TGGACGTCGT CGAGGTGTAC
GACTCCTTCA CCATCACCGC CGCGCTCAGC GTCGAGGCGC TCGGGTTCTG TGGACGCGGG
GAGGTGCTCG ACTTCATCCA GGACGGCCGG ATCCGGCCCG GCGGGTCCCT GCCGCTCAAC
ACCAACGGCG GCGGGCTCTC CTACTGCCAC CCCGGCCAGT ACGGCGTGCT GCTGCTCGTC
GAGGCCGTCC GTCAGCTGCG GGGCGAGTGC GCGGAACGGC AGGTCGCGGG CGCCGAGGTC
GCGGTCGCGC ACGGCACCGG CGGGATCATG TCCACCCACG CGACCGTCGT CTTGGGAGTG
GCCCGATGA
|
|---|
| Protein sequence | MTTGAAIVGA AESDLGVTGK SILTLQAQAV SRALADAGLT VADVDGIATT GISRFSATQL
ADYLSLRPTW TDSTFAGGSA FEMYVARAAQ AIAAGQATTV VISFASNQRS ARSRRLGGVH
EPWIPEAQFE EPYDPLYPVS YYAMAAQQYF HRFGGTREQL AEIAVAARDW ALLNPRAFRY
GAGRLSVEDV TGSTMISSPL GVADCCLVTD GGGAVVLTSL ERARDLARPP VEVLGYGERT
TNTSFTTVRD LTAPGAAESA ADAYARAGIT AADVDVVEVY DSFTITAALS VEALGFCGRG
EVLDFIQDGR IRPGGSLPLN TNGGGLSYCH PGQYGVLLLV EAVRQLRGEC AERQVAGAEV
AVAHGTGGIM STHATVVLGV AR
|
|---|
| |