Gene Noca_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4040 
Symbol 
ID4596554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4263890 
End bp4264375 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID639778646 
ProductCarD family transcriptional regulator 
Protein accessionYP_925224 
Protein GI119718259 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTCA CCGTCGGCGA AACGGTTGTT TACCCGAATC ACGGAGCCGC AGTCATCGAG 
GACATCGAGA TGCGGAAGAT CAAGGGAGAG GACCGGCAGT ACCTCGTACT CCGTATCGTC 
GCCCAGCAGG ACCTGGTGGT CAGAGTGCCC GCCTGCAACC TCGATCTCGT CGGGGTGCGC 
GACGTCGTCG ACAAGGAGGG CCTGGACCGT GTGTTCGACG TCCTCCGGGC CGCGCACGTC 
GAGGAGCCGA CGAACTGGTC GCGCCGCTAC AAGGCCAACC TGGAGAAGCT GCACAGCGGC 
GACGTCATGA AGGTCGCCGA GGTCGTGCGC GACCTGTGGC GCCGTGAGCG CGACCGTGGC 
CTGTCCGCCG GGGAGAAGCG GATGCTGGCC AAGGCCCGCC AGATCCTGGT CTCCGAGCTG 
GCGCTGGCCG AGCACACCAA CGAGGACAAG GCCGAGGCCC TCCTCGACGA GGTGCTCGCT 
TCCTGA
 
Protein sequence
MTFTVGETVV YPNHGAAVIE DIEMRKIKGE DRQYLVLRIV AQQDLVVRVP ACNLDLVGVR 
DVVDKEGLDR VFDVLRAAHV EEPTNWSRRY KANLEKLHSG DVMKVAEVVR DLWRRERDRG 
LSAGEKRMLA KARQILVSEL ALAEHTNEDK AEALLDEVLA S