Gene Noca_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3942 
Symbol 
ID4598077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4151791 
End bp4152633 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content75% 
IMG OID639778547 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_925126 
Protein GI119718161 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.145265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGGCC GGGTGGTGAT GAAGCAGGTC GAGCTGCACC ATGGCGCGGC CACCGACGTC 
GGCCTGGTCC GCGAGGTCAA CGAGGACTCC TACCTGGCCG CGCCCCCGGT GTTCGTCGTC
GCCGACGGCA TGGGCGGCCA CGAGGGCGGC GACGTGGCCA GCCGCATCGT GGTCGAGGAG
TTCGGCCGGC TCGCGACCGA CGGCTACGAC CCGCGGCGGG GCGTCGACGC GGTCACCGCG
ACCCTGGCGG CCTGCCAGGA GCGGATCACC GAGTACGCCG GCGTCCAGCG CGCCGAGGGC
GTGGCCCGCG GGCGCTCCGC GGGGACCACG GTCGTCGCGG CCCTGCTGAT CGAGGACGAC
GACGGGCCGG CCTGGCTGCT GGTGAACCTG GGCGACTCCC GGATCTACCG GTACGCCGAC
CGGCGGCTGA CCCAGGTCAG CGTCGACCAC AGCCTGGTGC AGGCGCTCGT CGACGCCGGC
CGGATCGGGG CCGACGAGGT CGCGACCCAC CCCGAGCGCA ACGTGATCAC CCGGGCCCTC
GGCGACTCCA CGGGAGGCCC CGCCGACTTC TTCGTGGTGT CGCTCGCGGA CGCCGAACGG
CTGCTGCTCT GCTCGGACGG GGTGAGCGGC CCGGTCGGTG ACGCCGACGT CGCCGAGATC
CTCGGCGCCT GCCCGGACCC GCGCGACGCG GCCGACCGGC TGGTCGCGGC CGCCCTCGAG
GCCGGAGGTG AGGACAACGC GACCGCCGTG GTCGTCGACG TGGTGGGGTG GGCTCCCGAG
AGCGGCTACG ACTCCGAACG TCAGCGCGCG AGCCTCGAGG AGAAGCTGGG AGCGCGGCCG
TGA
 
Protein sequence
MRGRVVMKQV ELHHGAATDV GLVREVNEDS YLAAPPVFVV ADGMGGHEGG DVASRIVVEE 
FGRLATDGYD PRRGVDAVTA TLAACQERIT EYAGVQRAEG VARGRSAGTT VVAALLIEDD
DGPAWLLVNL GDSRIYRYAD RRLTQVSVDH SLVQALVDAG RIGADEVATH PERNVITRAL
GDSTGGPADF FVVSLADAER LLLCSDGVSG PVGDADVAEI LGACPDPRDA ADRLVAAALE
AGGEDNATAV VVDVVGWAPE SGYDSERQRA SLEEKLGARP