| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3926 |
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| Symbol | |
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| ID | 4598061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4132924 |
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| End bp | 4134297 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639778532 |
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| Product | major facilitator transporter |
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| Protein accession | YP_925111 |
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| Protein GI | 119718146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCCCA CGTTCCGCTC CCTGCGCAAC CCGAACTACC GGCGCTACCT CGCCGGCAGC
CTGGTGTCCA ACACCGGGAC CTGGATGCAA CGGGTGGCCC AGGACTGGCT GGTGCTCCAG
CTGCCGGGCA ACAGCGGCAG CGAGCTCGGG ATCACCACCG GGCTGCAGTT CCTGCCGATC
CTGCTGCTGA GCCCCTACGC CGGGGTCGTC GCGGACCGGT TCCCGAAGCG CCGGCTGCTG
CAGGTCACCC AGGCGACGAT GGCGCTCGCG TCGCTGGCGC TCGGCCTGAT CGCGGTGCTC
GGGGTCGCGC AGACCTGGCA CGTCTACCTG ATCGCGTTCC TCTTCGGCAT CGGCGCGGCC
TTCGACGGTC CGGCCCGACA GTCGTTCGTC TCCGAGATGG TCGGCCCCGA GGACCTCACC
AACGCGGTGG GCCTGAACTC CGCGAGCTTC AACGCCGCCC GGATCCTCGG CCCGGCCGTC
GCCGGCCTGA TGATCGGCGC GCTCGGCGGT GGCGCGCAGG CGACCGGCTG GGTGATCCTC
GTCAACGCCG CGTCGTACCT CGCCGTGATC GGCCAGCTCC AGCGGATGGA CGTGGTGCTG
CTGCATCCGG CCGAGATCCA GGACCGCACG CCCGGCATGC TCGTCGACGG CGTCCGCTAC
GTGCGCAGCC AGCCCAAGAT GGTGCTGATC CTGATCATGG TCTTCTTCGC CGGCACCTTC
GGCATGAACT TCCAGATCAC GTCGGCGCTG ATGGCCACCG AGGTGTTCGG CAAGGGCGCG
GGGGAGTACG GCGTCCTCGG CTCGGCGCTC GCGGTCGGGT CGCTGACCGG GGCGCTGCTG
ACCGCCCGGC GAGTCCAGAT CCGGGTCCGG CTGCTGGTGC TCGCCGCGCT CGGCTTCGGC
ACCGCCGAGA TCATCGGTGG CCTGCTCCCG TCGTACCTGT TGTTCGCGCT GTTCTCACCG
GTCATCGGGT TCTTCACGCT GACCCTGCTC AGCTCGGCGA ACGCCACCCT CCAGCTGGAG
GCCGCCCCGG CGTTCCGCGG CCGGGTGATG GCCCTCTACA TGACCATCCT GATGGGCGGC
ACCCCGATCG GCGCGCCCAT CATCGGCTGG GTCGCCCAGC ACCTCGGTGC CCGGTGGGGC
CTGATCATCG GCGGGACGCT GACCATCCTC GGCGTACTGT TGGCGCTGGC CGCCCATTCC
CGCCTCCGCG GCGGGGTGCG CACCGTTTTG ACCGAGGTAG ACCACCCGGG TAACCTTTTT
CCTCGTGTCT GGGACAACCA GGCCGTCGCG CGTGCCCGGA AGCAGTCGGG GAGTCAGGTC
CTCGGATCCG GCACCGAAAC TCCAGCAGCG GAAGCCCTCA CCGGTTCTCG CTGA
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| Protein sequence | MSPTFRSLRN PNYRRYLAGS LVSNTGTWMQ RVAQDWLVLQ LPGNSGSELG ITTGLQFLPI
LLLSPYAGVV ADRFPKRRLL QVTQATMALA SLALGLIAVL GVAQTWHVYL IAFLFGIGAA
FDGPARQSFV SEMVGPEDLT NAVGLNSASF NAARILGPAV AGLMIGALGG GAQATGWVIL
VNAASYLAVI GQLQRMDVVL LHPAEIQDRT PGMLVDGVRY VRSQPKMVLI LIMVFFAGTF
GMNFQITSAL MATEVFGKGA GEYGVLGSAL AVGSLTGALL TARRVQIRVR LLVLAALGFG
TAEIIGGLLP SYLLFALFSP VIGFFTLTLL SSANATLQLE AAPAFRGRVM ALYMTILMGG
TPIGAPIIGW VAQHLGARWG LIIGGTLTIL GVLLALAAHS RLRGGVRTVL TEVDHPGNLF
PRVWDNQAVA RARKQSGSQV LGSGTETPAA EALTGSR
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