Gene Noca_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3904 
Symbol 
ID4598039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4109815 
End bp4110594 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID639778510 
Product50S ribosomal protein L4P 
Protein accessionYP_925089 
Protein GI119718124 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGG ACAACGAGAA GACCACCCCC GCGAAGAAGA CGGCTGCCAA GAAGACGGAC 
GCTGCGAAGA CGACCGCCGC GAAGAAGGCT GCTCCGGCCA AGAAGGCGGC GCCCGCGAAG
AAGGCTGCCC CGGCCAAGAA GGCCGCCGCG CCGAAGGCCG CGAAGGTCGA CTTCCCGGCC
GAGATCTTCG ACGTCGAGCT CAACGTCCCG CTGATCCACC AGGTCGTGGT GGCCCAGCAG
GCCGCCGCCC GGCAGGGCAC GCACGCCACC AAGACCCGCG GCGAGGTCCG CGGCGGTGGC
CGCAAGCCCT ACAAGCAGAA GGGCACCGGC CGCGCCCGCC AGGGCTCGAC CCGCGCCCCG
CAGTTCGCCG GCGGTGGCAC CGTCCACGGC CCGCAGCCGC GCAGCTACGA CCAGCGCACC
CCCAAGAAGA TGAAGGTCGC CGCCCTGCGC GGTGCCCTCT CCGACCGGGC GCGCAACGAC
CGGATCCACG TGGTGGAGTC GCTGATCACG GCAGAGGCCC CGTCGACCAG GACGGCCCTG
GCCGCGCTGT CGACGCTCTC CGAGCGCTCG CGGTTCCTCG TGGTGCTCGA GCGCACCGAC
ACCGTCACCT GGCTGTCGCT GCGCAACGCC CCCGAGGTGC ACATCGTGGC GGTCGACCAG
CTGAACACCT ACGACGTGCT GGCATCCGAT GACGTCGTCT TCACCCAGGG CGCCTACGAC
GCCTTCGTGA ACGGCACCGC CGTGTCCAAG CCCGTCCCGG CCGAGGAGGC TGCGAAGTGA
 
Protein sequence
MAEDNEKTTP AKKTAAKKTD AAKTTAAKKA APAKKAAPAK KAAPAKKAAA PKAAKVDFPA 
EIFDVELNVP LIHQVVVAQQ AAARQGTHAT KTRGEVRGGG RKPYKQKGTG RARQGSTRAP
QFAGGGTVHG PQPRSYDQRT PKKMKVAALR GALSDRARND RIHVVESLIT AEAPSTRTAL
AALSTLSERS RFLVVLERTD TVTWLSLRNA PEVHIVAVDQ LNTYDVLASD DVVFTQGAYD
AFVNGTAVSK PVPAEEAAK