| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3902 |
|---|
| Symbol | rplB |
|---|
| ID | 4598037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4108645 |
|---|
| End bp | 4109481 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778508 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_925087 |
|---|
| Protein GI | 119718122 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCC GCAAGTACAA GCCGACTACC CCGGGCCGCC GCGGCTCGTC GGTCGCCGAC
TTCGTCGAGA TCACCCGGAC CACTCCGGAG AAGTCGCTGA CGCGTCCGCT GCCCAAGAAG
GGTGGCCGCA ACAACCAGGG CCGGATCACC ACCCGGCACC AGGGTGGCGG CCACAAGCGC
GCCTACCGTC TGATCGACTT CCGTCGCTAC GACAAGGACG GCGTCCCGGC CAAGGTCGCG
CACATCGAGT ACGACCCGAA CCGCACCGCG CGGATCGCGT TGCTGCACTA CGTCGACGGC
GAGAAGCGCT ACATCATCGC GCCGAAGGAC CTGACGCAGG GCACCCGCGT GGAGTCGGGC
CCGAACGCCG ACATCAAGCC CGGCAACAAC CTGCCGCTGC GCAACATCCC GGTCGGTACG
ACGATCCACT GCGTGGAGCT GCGTCCGGGT GGCGGCGCGA AGATCGCCCG CTCCGCCGGC
AACAGCGCCC AGCTGGTCGC CCGTGAGGGC TCGCGTGCCA CGCTGCGGAT GCCGTCGGGC
GAGATGCGGT TCGTGGACGT GCGCTGCCGC GCGACCGTCG GTGAGGTCGG CAACGCCGAG
CAGTCCAACA TCAACTGGGG CAAGGCCGGC CGGATGCGCT GGAAGGGCAA GCGCCCGACC
GTCCGCGGTG TCGTCATGAA CCCGGTCGAC CACCCGCACG GCGGTGGCGA GGGCAAGACG
TCGGGTGGTC GTCACCCGGT GTCCCCCTGG GGCCAGCCCG AGGGCCGCAC GCGCAAGCGC
AAGGCCAGCG ACTCCCAGAT CATCCGTCGT CGCAAGACCG GCAAGAACAA GCGCTGA
|
|---|
| Protein sequence | MAIRKYKPTT PGRRGSSVAD FVEITRTTPE KSLTRPLPKK GGRNNQGRIT TRHQGGGHKR
AYRLIDFRRY DKDGVPAKVA HIEYDPNRTA RIALLHYVDG EKRYIIAPKD LTQGTRVESG
PNADIKPGNN LPLRNIPVGT TIHCVELRPG GGAKIARSAG NSAQLVAREG SRATLRMPSG
EMRFVDVRCR ATVGEVGNAE QSNINWGKAG RMRWKGKRPT VRGVVMNPVD HPHGGGEGKT
SGGRHPVSPW GQPEGRTRKR KASDSQIIRR RKTGKNKR
|
|---|
| |