| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3872 |
|---|
| Symbol | |
|---|
| ID | 4598007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4090699 |
|---|
| End bp | 4091601 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639778478 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_925057 |
|---|
| Protein GI | 119718092 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGTGG TGGGGGAGTC GCTGGTCGAC ATCGTGCACG GTCCAGACGG GAACACCACG
GAGTACGCCG GCGGCAGCGC CGCCAACGTT GCCGTCGCGC TGGCCCGGCT GGGCCGCCGG
GTCCGGTTCG TGACGGCGTG GGCGGCGGAC GAGCGGGGCC GGGTGCTCGC CGACCACCTG
GCCAGGGCCG GGGTCGAGCT CGCCGGCGAC CCGCACGTCC TGGCCCGGAC CGCGACCGCC
GCGGCGACCA TCGGCGCCGA CGGGGCGGCC AGCTACGAGT TCGACCTGGA GTGGCAGATC
CCGGACGTCA GCGCCGAGCC CGCCCCGCTG GTGCTGCACA CCTGCTCGCT GGGCGCGGTG
CTCGAGCCGG GCGCCGACGG GGTGCTCGCC CTGGTCGAGC GGCTGCGCGA CCGCGCCACG
ATCAGCTACG ACGTGAACGC GCGACCCGCC ATCACCGGCA CCGGCCCGGA CGTGGTCGCG
CTCGTGGAAC GGCTCGCCGC AGTCACCGAC CTGGTCAAGG CGTCCGACGA GGACCTCGCC
CACCTCTACC CACAGCTCGA CGAGGAGGCG GCGGCGCGCC ACCTGCTCGC GCTCGGCCCG
GCCGGCGTGG TCGTCACCCG CGGCGGCAAC GGCGCCGCCT GGTTCGCTGC GCACGCGATC
GTCGAGGCGG CCTCCCTGCC CGTCGAGGTC GCCGACACCA TCGGCGCCGG CGACACGTTC
GGCGCGGCCG TCGTCGACGC CCTGTGGCAG CGGGACCTGC TCGGCGCGGA CCATCGCTCC
GAGCTGAGGG AGCTGGACCC CGGCGTGATC GCGGAGGTGC TGGCGCACGC GACGCGGGCC
GCGGCCGTCA CGGTCTCCCG GCCCGGCGCG GACCCGCCGT ACCGCTCGGA GCTGGAGGCC
TGA
|
|---|
| Protein sequence | MLVVGESLVD IVHGPDGNTT EYAGGSAANV AVALARLGRR VRFVTAWAAD ERGRVLADHL
ARAGVELAGD PHVLARTATA AATIGADGAA SYEFDLEWQI PDVSAEPAPL VLHTCSLGAV
LEPGADGVLA LVERLRDRAT ISYDVNARPA ITGTGPDVVA LVERLAAVTD LVKASDEDLA
HLYPQLDEEA AARHLLALGP AGVVVTRGGN GAAWFAAHAI VEAASLPVEV ADTIGAGDTF
GAAVVDALWQ RDLLGADHRS ELRELDPGVI AEVLAHATRA AAVTVSRPGA DPPYRSELEA
|
|---|
| |