Gene Noca_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3819 
Symbol 
ID4595884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4038844 
End bp4040415 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content72% 
IMG OID639778427 
Productalkaline phosphatase 
Protein accessionYP_925006 
Protein GI119718041 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCCGAC ACGGGGTCGC CTCCGGCGAC CCGCTTCCCG ACGCCGTGCT GATCTGGACC 
CGGGTGACGC CGACCGCCGC GAGCCGGCCG GGGTCGGGCC ACGGCCCCCG GGTCGAGGTC
CGCTGGGAGG TGGCGCGCGA CGCCGACTTC CGCCGGGTGG TGCGCCGCGG CAGGTTCCAG
ACCGGGCCGA GCCGCGATCA CACGGTCAAG GTCGACGTCA CCGGGCTGGA GCCGGCGACC
TGGTACCACT ACCGCTTCCG GTACGACGAC GCCGTCAGCC CGGTCGGCCG GGCCCGCACC
GCCCCGGCGA GCGACGCCAG CCCGGACCAC CTGCGCTTCG GCGTCGTGTC GTGCGCGAAC
CTGCAGGCGG GCTGGTTCTC CGCCTACCGG GGCCTTGCCG CGCGCGACGA CCTGCACGCC
GTGCTGCACC TCGGCGACTA CCTCTACGAG TACGGCCCCG GCGAGTATGG CTACGGGATC
GACGACGAGG ACATCCGCTC GCACCAGCCG GCCCACGAGA TGCTCACGCT GGCCGACTAC
CGCCAGCGGC ACGCCCAGTA CAAGCAGGAC CCGGATCTGC AGGCGCTGCA CGCGAAGTAC
CCGTGGGTGA TCACCTGGGA CGACCACGAG GTGACCAACG ACGCCTATCG CGAGGGCGCC
GAGAACCACA ACCCCGACCT CGGCGAGGGC GACTTCCACC GGCGCCGCGC CCGGGCGCAT
CGCGCCTACG ACGAGTGGAT GCCGGTGCGC ATGGACGGCA CCGCCGGGCT GCGCGACGGC
GACCGGTTGT TCCGGCGGCT GCAGTTCGGC CGGCTGGCGG AGATCAGCAT GCTCGACCTG
CGCACCTACC GCGACGAGCA GGTCGCACGC CCGCTCCCCG AGCCGCTCCC GGTGGCCGAC
GCGGCGGTGA GCGACCCCGA CCGCACCATC GTGGGCCGCC AGCAGCTCGA CTGGCTCAAG
CAGTCGCTCT CGCGCGGTCG CGCGCAGTGG AAGATCATCG GCAACCCGGT GATGATCGCG
CCGGTGGACT TCGGCGGGCT CCCCGACGAG CTGATCGACC CGGTCAACGA CGTCACCGGG
CTGCTCCCCC GCGACGGCCT GCCCTACAAC GTCGACCAGT GGGACGGGTA CACCGACGAC
CGCCGCGAGG TCTTCACGCA CATCCGCGAC CACCAGGTGA GCGACGCGCT GTTCGTGACC
GGCGACATCC ACTCCGGCTG GGCGTGCGAG CTGCCGTACG ACGCCTCAAC GTACCCAGCC
GGCGACTCCG CGGGCGTGGA GTTCGTGTGC TCGTCGGTCA CCTCGAACAA CCTCAAGGAC
CTCACCGGCA CGCCCGCGCA CACCACGAGC ACCGCGGTCG AGCAGACGAT CCTGGCCAAC
AACCGGCACA TCAAGTACCT CAACTTCGAC GACCACGGCT TCTCCGTCCT GGACGTGACG
CCGCTGCGCG CGCAGATGGA CTGGTACGTC ATCGGCGACC GCGCCGACCG GGACACCTCG
ATCACCTGGT CGGTCTCCTA CGCGACCCGC ACCGGCACCG GCCGGGTCGA GCAGGTCGGG
GAGCCGGTGT GA
 
Protein sequence
MFRHGVASGD PLPDAVLIWT RVTPTAASRP GSGHGPRVEV RWEVARDADF RRVVRRGRFQ 
TGPSRDHTVK VDVTGLEPAT WYHYRFRYDD AVSPVGRART APASDASPDH LRFGVVSCAN
LQAGWFSAYR GLAARDDLHA VLHLGDYLYE YGPGEYGYGI DDEDIRSHQP AHEMLTLADY
RQRHAQYKQD PDLQALHAKY PWVITWDDHE VTNDAYREGA ENHNPDLGEG DFHRRRARAH
RAYDEWMPVR MDGTAGLRDG DRLFRRLQFG RLAEISMLDL RTYRDEQVAR PLPEPLPVAD
AAVSDPDRTI VGRQQLDWLK QSLSRGRAQW KIIGNPVMIA PVDFGGLPDE LIDPVNDVTG
LLPRDGLPYN VDQWDGYTDD RREVFTHIRD HQVSDALFVT GDIHSGWACE LPYDASTYPA
GDSAGVEFVC SSVTSNNLKD LTGTPAHTTS TAVEQTILAN NRHIKYLNFD DHGFSVLDVT
PLRAQMDWYV IGDRADRDTS ITWSVSYATR TGTGRVEQVG EPV