| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3813 |
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| Symbol | |
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| ID | 4595878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4033847 |
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| End bp | 4034620 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778421 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_925000 |
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| Protein GI | 119718035 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0641622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAG GGATTGCACC GAGCCGTTCC GACGAGACCA TCCGTCTCTT CACCCTCCGC
TCCGCCGCCG ACCCGGCAGA GCGGGCCGAG ATCGAGGACC AGCTGATCCG CCTGAACATG
GCGGTGGCCG TGGACGCGAC CCGTCGCTTC CGCGGGCGCG GCATCGCCAC CGACGACCTC
GAGCAGGTCG CGTACGTCGG CCTGGTCAAG GCGGTCAAGG GTTTCGACCC GGACCGCGGC
CACGACTTCT TGAGCTTCGC GATCCCGACC ATCCGCGGCG AGGTCCGCCG GCACTTCCGC
GACCTCGGCT GGACGGTGCG CCCGCCCCGC TCCATCCAGG AGGCGCAGAC CAAGATCATC
GCCTGCGAGG GCGAGCTCTA CCAGCAGCTC GGCCGGGCGC CGCGCCCCTC GGAGATCGCC
GAGCACCTCG GCCTCGACCG CGACCTCGTG GTGGAGGCGC TCGGCGCCAG CGGCTGCTTC
GCGCCGGCCT CGCTCGACGC CCCCGCGCAC GAGGGCGACG ACGACCCGAT CGGGCGCCGC
CTGGGCTTCA CCGACGAGGG CTTCGACGTG GCCGAGGCCC GCGCGGTGCT CGCGCCGGTG
CTCGCGAAGC TCTCGAAGCG GGAGCGGATC ATCGTGGAGA TGCGCTTCTT CCGCGGCTGC
ACCCAGGCCC AGATCGGCGA GGCGATCGGC GTGACCCAGA TGCAGGTCTC GCGGCTGCTG
ACGCGGCTGA TGGCCCGGCT GCGCGAGGAG CTGAACGTCA CGCTCGCCGC CTGA
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| Protein sequence | MTAGIAPSRS DETIRLFTLR SAADPAERAE IEDQLIRLNM AVAVDATRRF RGRGIATDDL
EQVAYVGLVK AVKGFDPDRG HDFLSFAIPT IRGEVRRHFR DLGWTVRPPR SIQEAQTKII
ACEGELYQQL GRAPRPSEIA EHLGLDRDLV VEALGASGCF APASLDAPAH EGDDDPIGRR
LGFTDEGFDV AEARAVLAPV LAKLSKRERI IVEMRFFRGC TQAQIGEAIG VTQMQVSRLL
TRLMARLREE LNVTLAA
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