Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3788 |
Symbol | |
ID | 4597534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4004575 |
End bp | 4006932 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639778396 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_924975 |
Protein GI | 119718010 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAGC AGACCGAACC GATACCCACC ACGGAGAGCG AGTCGCCGCA GACGGTCGAG CTCACCATCG GCGGGATGAC CTGCACCTCC TGCGCCGCCC GGATCGAGAA GAAGCTGGCG AAGATCGACG GCGTGGTCGC CTCGGTCAAC TACGCGACGG AGAAGGCCCG GGTCACGTAC GTCGCACCGG TGACCGTCGA CCAGCTGGTA TCGGTCGTCG AGGCCACCGG GTACACGGCA GCTCAGCACG AGTCCGTCCC GACGGCCCCG GAGGGCGGCG CCGGGACGGA CAGCACCGAG GCCGCGCCCG ATCCAGCGAC CGCCGCCTGG CACCGCCGGC TGACGATCTC GGCGGTGCTG ACGCTCCCCG TCCTCCTGCT GGCGATGGTT CCCGCGCTGC AGTTCGACAA CTGGCAGTGG ATCTCCCTCA CGTTGGCATC GCCTGTCGTC GCCTGGGGGG CCTGGCCGTT CCACCGCGCG GCCGTCGTCA ACGCCCGGCA TGCGACCGCG ACCATGGACA CCTTGATCTC CGTGGGCGTC ACGGCCGCCT ACCTGTGGTC CTTGTGGGCG CTGCTGTTCA CCGATGCCGG GATGACCGGC ATGCGGATGC CCTTCCGGCT GCTCCCGGAC GACGCCGGCG GTGCGCACAT CTACCTCGAG GTCGCGGCCG CCGTCACGAC GTTCATCATC GCGGGGCGCT ACTTCGAGGC GCGCGCGAAG CGGCAGTCCG GCGCAGCCCT CCGCGCACTC CTCGACCTGG GCGCCAAGGA CGTCGCCGTG CTGCGCCACT CCAGCGACGG CGCCGCCCGG GAGGTCGAGA CCCGGATCCC GATCGGCCAG CTGGACGTGG GAGATCGGTT CGTGGTCCGC CCGGGCGAGA AGATCGCCAC GGACGGCGTC GTGGAGGAAG GGTCCTCCGC GGTCGACGCC TCGATGCTCA CCGGTGAGCC GGTCCCGGTC GAGGTCGGCC CCGGTGACCC TGTCGTCGGA GCGACCATCA ACGCCGGCGG CCGCCTGGTC GTCAGAGCCA GCCGGGTGGG TTCGGACACG CAGCTCGCCC AGATGGCGAG CCTCGTCGAG GCGGCCCAGT CCGGGAAGGC CCAGGTACAG CGGCTCGCGG ATCGCGTCTC CGGTGTCTTC GTGCCGATCG TGATCGCGAT CTCACTGGCC ACCCTCATCA CCTGGCTGGC GACCGGGCAC ACCGCCACCG CGGCCTTCAC CGCGGCGGTC GCCGTGCTGG TCATCGCCTG CCCGTGCGCG CTGGGCCTCG CAACGCCGAC CGCGCTGCTC GTCGGCACCG GACGCGGCGC GCAGATCGGC ATCCTGATCA AGGGCCCGGA GGTGCTCGAA TCCACCCGGG TCGTCGACAC GATCGTGCTC GACAAGACCG GCACCGTCAC CACCGGCAAG ATGACGCTCG TCGGGGCGGT GCCCTCTATC GGAACCGACA CCGATCAGCT GCTCGGCCTC GCGGGGGCGC TCGAGGACGC GTCCGAACAC CCCATCGGGC GTGCCATCGC CGCCGGCGCC GCCAGCCTGA CCGGCCGACC ACTCAGCCCG GTCCAGGGGT TCAGCGCCAC CCAGGGGCTC GGCGTGTCGG GAGTCGTCGA CGGCCACGAG GTGGTGGCGG GGCGGCCGAG CTGGCTGCGC GAAGCGTGGG GCCAGGCCCT GGATGAGCCG CTGCTCCGTG CGGTGGCCGA TGCCGAGGGG GTCGGCCGGA CGGCCGTCGC CGTCGGTTGG GACGGCGCGG CTCGCGGCGT GGTCATCGTC GCCGACACCC TCAAGCCGAC GAGCGTGCAG GCGATCTCCG AGCTCAAGGC ACTCGGGCTC ACCCCGGTGC TGCTGACCGG CGACAACCAG CGCGCGGCGC ACGCAGTAGC GGCCGAGGTC GGCATCGACG AGGTCATCGC CGAGGTCCTG CCGGCGGACA AGGTAGGCGT GGTCGAGCGG CTCAGGGCCG AGGGTCACAC GGTCGCGATG GTCGGCGACG GCACCAACGA CGCTGCCGCG CTCGCAGCCG CCGACCTCGG CCTTGCGATG GGGACCGGCA CGGACGTCGC GATCGAGGCC TCGGACCTCA CCCTCGTCCG GGGGGACCTG CGCACCACGG TGGACGCGAT CCGACTGTCG CGCCGGACCC TGCGGACGAT CAAGACGAAC CTCTTCGCCG CCTTCGTCTA CAACGTCGCC GCCATCCCAT TGGCGGCGCT GGGCCTGCTC AACCCCGTGA TCGCGGGCGC GGCCATGGCG CTGTCGTCGG TGTCCGTGGT GTCCAACAGC CTGCGCCTGC GCCGGTTCGA GGCCATCTCC GTCCAGCGGT CCACGACTGG CGAAGTCGAG CCCATGACCG GCACCTGA
|
Protein sequence | MTQQTEPIPT TESESPQTVE LTIGGMTCTS CAARIEKKLA KIDGVVASVN YATEKARVTY VAPVTVDQLV SVVEATGYTA AQHESVPTAP EGGAGTDSTE AAPDPATAAW HRRLTISAVL TLPVLLLAMV PALQFDNWQW ISLTLASPVV AWGAWPFHRA AVVNARHATA TMDTLISVGV TAAYLWSLWA LLFTDAGMTG MRMPFRLLPD DAGGAHIYLE VAAAVTTFII AGRYFEARAK RQSGAALRAL LDLGAKDVAV LRHSSDGAAR EVETRIPIGQ LDVGDRFVVR PGEKIATDGV VEEGSSAVDA SMLTGEPVPV EVGPGDPVVG ATINAGGRLV VRASRVGSDT QLAQMASLVE AAQSGKAQVQ RLADRVSGVF VPIVIAISLA TLITWLATGH TATAAFTAAV AVLVIACPCA LGLATPTALL VGTGRGAQIG ILIKGPEVLE STRVVDTIVL DKTGTVTTGK MTLVGAVPSI GTDTDQLLGL AGALEDASEH PIGRAIAAGA ASLTGRPLSP VQGFSATQGL GVSGVVDGHE VVAGRPSWLR EAWGQALDEP LLRAVADAEG VGRTAVAVGW DGAARGVVIV ADTLKPTSVQ AISELKALGL TPVLLTGDNQ RAAHAVAAEV GIDEVIAEVL PADKVGVVER LRAEGHTVAM VGDGTNDAAA LAAADLGLAM GTGTDVAIEA SDLTLVRGDL RTTVDAIRLS RRTLRTIKTN LFAAFVYNVA AIPLAALGLL NPVIAGAAMA LSSVSVVSNS LRLRRFEAIS VQRSTTGEVE PMTGT
|
| |