Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3544 |
Symbol | |
ID | 4595726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3755792 |
End bp | 3757954 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639778152 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_924731 |
Protein GI | 119717766 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.143219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGTCC CCAAGACCTT CCGCGGGCTG CCGCTCACCG GCGGCGCGGC GGGCGCCGCC GACGAGGGGG CCGACCGCAC CTGGCTGGCC CCCGAAGGCA TCGACATCAA GGGGCTCTAC ACGCCCGCCG ACCTCGAGGG CCTCGACGCC CTCGACACGC TGCCGGGCCT GAGCCCGTTC CTGCGCGGCC CCTACCCGAC GATGTACACC ACCCAGCCGT GGACCATCCG GCAGTACGCC GGCTTCTCCA CCGCGGAGGA GTCCAACGCG TTCTACCGCC GCAACCTCGC GGCCGGCCAG AAGGGCCTCA GCGTCGCGTT CGACCTGGCC ACCCACCGCG GCTACGACTC CGACCACCCG CGGGTCCGCG GCGACGTCGG CATGGCCGGT GTCGCCATCG ACTCGATCTA CGACGCCCGC ACGCTGTTCG ACGGCATCCC GCTCGACGCG ATGTCGGTCT CGATGACCAT GAACGGCGCG GTGCTGCCGA TCATGGCGCT CTACATCGCG GCGGCCGAGG AGCAGGGGGT GAAGCCTTCG CTGCTCGCGG GGACCATCCA GAACGACATC CTCAAGGAGT TCATGGTCCG CAACACCTAC ATCTACCCGC CGGCCCCGAG CATGCGGATC ATCAGCGACA TCTTCCGGTA CACCGCCGAG CGGATGCCGC GCTTCAACTC GATCTCGATC TCCGGGTACC ACATGCAGGA GGCGGGGGCC ACCAACGACC TGGAGCTGGC CTACACGCTG GCCGACGGTG TCGAGTACAT CCGGGCCGGC CTGTCCGCGG GGCTCGACAT CGACCGGTTC GCGCCGCGGC TGTCGTTCTT CTGGGCGATC GGCATGAACT TCTTCATGGA GGTCGCGAAG ATGCGCGCCG CGCGGGCCCT GTGGGCCCGG CTGGTGCGCC AGTTCGACCC GCAGAACCCC AAGTCGCTCA GCCTGCGCAC CCACAGCCAG ACCTCCGGCT GGTCGCTGAC CGCGCAGGAC GTCTTCAACA ACGTCGGACG CACCTGCATC GAGGCGATGG CGGCGACCCA GGGACACACC CAGTCGCTGC ACACCAACGC ACTGGACGAG GCGATCGCGC TGCCGACCGA CTTCTCGGCC CGGATCGCCC GCAACACCCA GCTGCTGCTC CAGCAGGAGA GCGGCACCAC CGGCACCATC GACCCGTGGG CCGGCTCCTA CTACGTGGAG CGGCTGACCC ACGATCTCGC CGAGCGGGCC TGGGCGCACA TCCTCGAGGC CGAGGAAGCC GGTGGCATGG CGGCCGCGAT CGAGCAGGGC ATCCCGAAGA TGCGCATCGA GGAGGCTGCC GCCCGCACGC AGGCGCGGAT CGACGCAGGC AGCCAGAAGG TGATCGGCGT CAACACCTAC CGGCTGGCGG CCGAGGACAA GCTGGACGTG CTCAAGGTCG ACAACGACGA CGTCTATCGC CAGCAGATCG CCAAGCTCGA GCGGCTCCGG GCCGAGCGCG ACGACCACGA GGTCGAGCGC ACCCTCGAGG CGCTGACCAA CGCCGCCGAC CAGGGCCCCT CGAGCAGCCT CGACGGGAAC CTGCTCGCGC TCGCGGTCGA CGCCGCCCGC GCGAAGGCGA CCGTGGGGGA GATCTCCGCA GCGCTGGAGA AGGTGTACGG GCGGCACCAG GCCGTGATCC GTACCATCAG CGGCGTGTAC AGGGCCGAGG CGGACCGGGC CGGCGACGCG GTCGTCGCCC AGGTGCTGGA GGAGACCGAG CGGTTCGAGG AGGCCGAGGG CCGGCGCCCG CGGATCCTCG TCGCGAAGAT GGGCCAGGAC GGCCACGACC GCGGCCAGAA GGTCGTGGTC AGCGCGTTCG CCGACCTGGG CTTCGACGTG GACGTGGGGC CGCTGTTCTC CACGCCCGAG GAGGTCGCCC AGCAGGCGGT GGACGCGGAC GTCCACATCG TGGGGGTCTC CTCGCTCGCG GCCGGCCACC TGACGCTGCT GCCCGCGCTG AAGAAGGCGC TGGCCGACCA GGGCCGGCCG GACATCATGA TCGTGATCGG CGGGGTGATC CCGCCCGACG ACGTGGCGAC GCTGATGGAG ATGGGCGCCG CCGCGGTGTT CCTGCCCGGC ACGGTCATCG CCGGGTCCGC CCTCGACCTG CTGGCCCGGC TGCGCGAGCA GCTCGGCCAC TGA
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Protein sequence | MTVPKTFRGL PLTGGAAGAA DEGADRTWLA PEGIDIKGLY TPADLEGLDA LDTLPGLSPF LRGPYPTMYT TQPWTIRQYA GFSTAEESNA FYRRNLAAGQ KGLSVAFDLA THRGYDSDHP RVRGDVGMAG VAIDSIYDAR TLFDGIPLDA MSVSMTMNGA VLPIMALYIA AAEEQGVKPS LLAGTIQNDI LKEFMVRNTY IYPPAPSMRI ISDIFRYTAE RMPRFNSISI SGYHMQEAGA TNDLELAYTL ADGVEYIRAG LSAGLDIDRF APRLSFFWAI GMNFFMEVAK MRAARALWAR LVRQFDPQNP KSLSLRTHSQ TSGWSLTAQD VFNNVGRTCI EAMAATQGHT QSLHTNALDE AIALPTDFSA RIARNTQLLL QQESGTTGTI DPWAGSYYVE RLTHDLAERA WAHILEAEEA GGMAAAIEQG IPKMRIEEAA ARTQARIDAG SQKVIGVNTY RLAAEDKLDV LKVDNDDVYR QQIAKLERLR AERDDHEVER TLEALTNAAD QGPSSSLDGN LLALAVDAAR AKATVGEISA ALEKVYGRHQ AVIRTISGVY RAEADRAGDA VVAQVLEETE RFEEAEGRRP RILVAKMGQD GHDRGQKVVV SAFADLGFDV DVGPLFSTPE EVAQQAVDAD VHIVGVSSLA AGHLTLLPAL KKALADQGRP DIMIVIGGVI PPDDVATLME MGAAAVFLPG TVIAGSALDL LARLREQLGH
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