| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3535 |
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| Symbol | deoA |
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| ID | 4595717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3745401 |
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| End bp | 3746687 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639778143 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_924722 |
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| Protein GI | 119717757 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00606286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACC ATGACGCCGT CGAGGTGATC GCCGCCAAGC GCGACCGCCA CGAGCTGACC
GACAGCCAGA TCGACTGGGT GGTCGACGCC TACACCAGGG GTGCGGTCGC CGACGAGCAG
ATGTCGTCGC TCGCGATGGC CATCCTGCTC AACGGGATGA ACCGGCGCGA GATCGCCCGC
TGGACCGCCG CGATGATCGC GTCGGGGGAG CGGATGGACT TCTCCTCGCT CTCGCGGCCG
ACCGCCGACA AGCACTCCAC CGGCGGGGTC GGCGACAAGA TCACGCTGCC GCTCGCGCCG
CTGGTCGCCG CCTGCGGGGT CGCCGTCCCG CAGCTCTCCG GGCGCGGCCT GGGCCACACG
GGTGGCACCC TCGACAAGCT CGAGGCCATC CCCGGCTGGC GGGCGGCCCT GTCGAACGAC
GAGATGATGG CGCAGCTCGA GTCGGTGGGT GCGGTGATCT GCGCGGCCGG CGATGGGCTG
GCGCCCGCGG ACAAGAAGCT CTACGCGCTG CGCGACGTGA CCGGCACCGT CGAGGCGATC
CCGCTGATCG CCTCCTCGAT CATGTCCAAG AAGATCGCCG AGGGCACCGG CTCACTGGTG
CTCGACGTCA AGGTCGGCAC CGGCGCGTTC ATGAAGGACA TCGACTCCGC GCGCGAGCTC
GCCGAGACGA TGGTCGCGCT CGGCACGGAC GCGGGCGTCC ACACGGTCGC GCTCCTGACC
GACATGTCTA CCCCCCTGGG GCGCACCGCC GGCAACGCGA TCGAGGTCGC CGAGTCGGTG
GAGGTGCTCG CCGGCGGCGG CCCGGCCGAC GTCGTGGAGC TGACCCTGGC GCTGGCCCGC
GAGATGCTGG CCGGCGCGGG TCGCGACGAC GTCGACCCGG CCGACAAGCT GGCCGACGGC
TCCGCGATGG ACGCCTGGAA GGCGATGATC CGGGCCCAGG GCGGCGACCC CGACGCCGCG
CTCCCGCAGG CGCGGGAGAG CCATGTCGTC AGTGCTCCCG CGTCCGGCGT GCTGACCCGG
CTGGACGCGA TGGCCGTCGG GCTGGCCGCC TGGCGGCTGG GCGCCGGCCG GGCCCGCAAG
GAGGACCCGG TGCAGGCCGG CGCCGGCGTC GTCTGGCACG CCCGCCCCGG GGACGCCGTC
ACCGAGGGGC AGCCGCTGTT CACGCTGCTC ACCGACGACG AGCACCGGTT CGAGCGGGCC
CTGGACTCAC TCGGGGGCGG CTACGACATC GCGCCCGCGG ACTCGCCGTA CACCCCGACG
CCGCTGGTGA TCGACCGGAT CGCCTGA
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| Protein sequence | MPDHDAVEVI AAKRDRHELT DSQIDWVVDA YTRGAVADEQ MSSLAMAILL NGMNRREIAR
WTAAMIASGE RMDFSSLSRP TADKHSTGGV GDKITLPLAP LVAACGVAVP QLSGRGLGHT
GGTLDKLEAI PGWRAALSND EMMAQLESVG AVICAAGDGL APADKKLYAL RDVTGTVEAI
PLIASSIMSK KIAEGTGSLV LDVKVGTGAF MKDIDSAREL AETMVALGTD AGVHTVALLT
DMSTPLGRTA GNAIEVAESV EVLAGGGPAD VVELTLALAR EMLAGAGRDD VDPADKLADG
SAMDAWKAMI RAQGGDPDAA LPQARESHVV SAPASGVLTR LDAMAVGLAA WRLGAGRARK
EDPVQAGAGV VWHARPGDAV TEGQPLFTLL TDDEHRFERA LDSLGGGYDI APADSPYTPT
PLVIDRIA
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