| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3502 |
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| Symbol | |
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| ID | 4595601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3710699 |
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| End bp | 3712123 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639778110 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_924689 |
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| Protein GI | 119717724 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTC TCGACGTGGC GGTCGCACCG GCCCCGACGC GGTCCCGACG CTCGCCGGTG
TGGCTCGCCG TCCTCGCGGC CTCGCTGCCG ATGTTCATGG CCACCCTTGA CAACCTGGTG
ATGACCAGCG CGCTGCCGGT GATCCGGACC GACCTCGGCT CGTCGGTCAA CCAGCTCTCC
TGGTTCATGA ACGCCTATAC GCTGACCTTC GCGACCTTCA TGCTCCCCGC CGCGACCCTC
GGCGACCGGC TCGGCCGACG GCGGATGATG CTCGCGGGCC TGACCGTCTT CACGCTCGCG
TCGGTCGCGT CGGCGCTGAG CACCACCTCG GAGGCGCTGA TCGCGGCGCG CGCCGTGCAG
GGCCTCGGTG CGGCGGCGAT CATGCCGCTC TCCCTGACCC TGCTCGCCTC CGCCGTGCCC
CCGGCCCTGC GCTCGGCCGC CATCGGGATC TGGGGTGGCG TCAGCGGGCT CGGTGTCGCG
CTCGGTCCCG TGGTCGGCGG CGCGGTCGTC GAGGGCGTCA GCTGGCAGGC GATCTTCTGG
CTCAACGTCC CGGTGGCCGC GGTCGCGGGG CCGCTGCTGG TCCTCGGGGT GCGCGAGTCG
CACGGCGCCT GGCAGCGGCT CGACCTGGTC GGGACCCTGC TCGTCGGCGG CGCGGTCCTC
CTCGGGATCT GGGGCATCGT GCACGGCAAC GACGACGGCT GGGGCGATCC GCGGGTCCTC
GGCCCGCTCG TGGTCGCTGC GCTGCTGGCG CCGGCGTACC TGCGCTGGGC CCGAGGTCGT
TCCCACGCGG TCCTGCCGCT GCGGCTGTTC GCCGCGCGTG GGTTCTCCGT CGCGAACGTG
ATCGCCCTGT TCTTCACCAT CGGGATGTTC GGGACGGTCT TCCTGCTCAC GCAGTACCTC
CAGGTGGTCC AGGGCTACAG CCCGCTCGCC GCTGGCGTGC GCACGCTGCC GTGGACGGCC
GCACCGATGG TGGTCGCGCC GCTCGCCGGC CTGCTGGCGC CGCGCACCGG CTTGCGGGCG
CTGCTCCTGA CGGGGCTGGC GCTCCAGACC GGGTCGCTGG TCTGGTTCGC GGTGCTCACC
GAGACCGCTG CGGGCTACCC GGCGTTCATG CCGGCGCTGC TGATGGCCGG GGTCGGGATG
GGGCTGACGT TCGCACCGAT GGCGACTGCC GTGCTCGAGG GCCTGCCCGA GGAGGACTTC
GCCATGGCCA GCTCGGCCAA CTCCACGATC CGCGAGTTCG GGGTCGCGCT CGGCATCGCC
GTGCTCACGG CGGTCTTCCT CGGCAACGGC GGCGCGATCG AGCCGCTCGG GTACGACGGC
GCGATCGGCC CGGCGCTGCT GACCGGCGCC GGGGCCGTGG CGGTTGCGAC ACTCGCCGCG
CTGCTCGCTC CCGGCAGGGG GAGGCGGGCC ACCCCTCGGG CCTGA
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| Protein sequence | MTALDVAVAP APTRSRRSPV WLAVLAASLP MFMATLDNLV MTSALPVIRT DLGSSVNQLS
WFMNAYTLTF ATFMLPAATL GDRLGRRRMM LAGLTVFTLA SVASALSTTS EALIAARAVQ
GLGAAAIMPL SLTLLASAVP PALRSAAIGI WGGVSGLGVA LGPVVGGAVV EGVSWQAIFW
LNVPVAAVAG PLLVLGVRES HGAWQRLDLV GTLLVGGAVL LGIWGIVHGN DDGWGDPRVL
GPLVVAALLA PAYLRWARGR SHAVLPLRLF AARGFSVANV IALFFTIGMF GTVFLLTQYL
QVVQGYSPLA AGVRTLPWTA APMVVAPLAG LLAPRTGLRA LLLTGLALQT GSLVWFAVLT
ETAAGYPAFM PALLMAGVGM GLTFAPMATA VLEGLPEEDF AMASSANSTI REFGVALGIA
VLTAVFLGNG GAIEPLGYDG AIGPALLTGA GAVAVATLAA LLAPGRGRRA TPRA
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