| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3468 |
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| Symbol | |
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| ID | 4596249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3676441 |
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| End bp | 3677766 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 639778074 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_924655 |
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| Protein GI | 119717690 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00974022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC TGCCGCTCCG GCTGGACCGC GATGCCCCTG GCCCGCTGGG CGTGCAGCTC
TCCGGGCGGA TCCGCGACCT GGTCCTGGCC GGCACGCTGG CACGGGGCGA CCGGTTGCCG
AGCACCCGGG CGCTGGCCGC CGAGCTCGGG GTCAGCCGGG CGGTGACGGA GCAGGCCTAC
GAGCAACTGC TGGCCGAGGG CTGGCTGACC GCCCGCCGCG GCGCCGGCAC CTTCGTCGCG
GCCGACGGGT CCGGGCGCGC CGGCGTACCG CCCCGCCCGA CGCCGGCCCG ACCCGGGCAG
CTGGTCCGCC TCGACGCCGG GACGCCGTGG ATCGACCCGC GGCACGCCGC CGGGTGGCGG
CGCGCCTGGC GGGAGGTGTC GACGGCCCGC CCGCCGCGGG GGTACGACGA CCCGCGCGGC
CTGCCCGAGC TGCGGGCGGC GCTGGCCGAT CGCCTGGCCC GCACCCGCGG CCTGGTCGTG
CACCCGGACG AGGTCGCCGT CGTGAACGGG ACCACCGACG GGCTGCGGCA CCTGCTGACC
GCGTCGCCGC CCGGGCCGGT GGCTCTGGAG GACCCGGGCT ACCGGGCGGC GGTCGAGACC
GTGCGCGGCC TGGGGCGCGC GGTGCGGGAC CTGCCCGCGC TGGCGCCGGT GACCGACCTG
ACCGGTGTCG CCGCGGCGTA CGTCACGCCG GCCCACCAGC ACCCGTTGGG CCGGGTGCTG
CCGGGACCCG AGCGGGTCGC GCTGCTGGCC GCGGCGGACG CCGCCGGGAC GCTCGTGGTC
GAGGACGACT ACGACTCCGA GTTCCGCTAC GACGTGGCGC CGGTTCCGGC GCTCGCGAGC
CTGGACCGGA ACCGGGTCGC CTACCTCGGG ACCGCCGCCA AGTCCGTGGC ACCGACCCTG
CGCCTGGGCT GGCTGGTCGC TCCGCCCGAG CTCGGCGAGC GGGTGCAGGC GCGCCGCGTC
GTCACCCACG AGGGTGCTCC GTGGCCGGTC CAGCGGGCGT ACCTCGCGCT CCTGCGCGAC
GGGTACGTCG ACCAGGTCGT GCGCACCGCC CGCCGGGTCT ACGCCGAGCG GGCGCCGCGG
GTCGCGGCCG CGCTCGCGCC GTACGCCGAG CTGGCCGGCC CGCTCGCGGG CATGTACTCG
ACCTGGCTGC TGCCGGCGGG CGACGCCGTC CGGGCCCGGG ACGCCGCCCG CGGTGCGGGC
TTCGAGGTGA ACCTGCTCGC GGACTACTGC CGCTCGGCGA CGCTCACCGG GCTGGTCGTC
GGGTTCGGCG GGGTCACCGA CGAGGAGCTC GACCGGGCCC TGTCCGCCCT GGTCTCAGCC
CTCTGA
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| Protein sequence | MPTLPLRLDR DAPGPLGVQL SGRIRDLVLA GTLARGDRLP STRALAAELG VSRAVTEQAY
EQLLAEGWLT ARRGAGTFVA ADGSGRAGVP PRPTPARPGQ LVRLDAGTPW IDPRHAAGWR
RAWREVSTAR PPRGYDDPRG LPELRAALAD RLARTRGLVV HPDEVAVVNG TTDGLRHLLT
ASPPGPVALE DPGYRAAVET VRGLGRAVRD LPALAPVTDL TGVAAAYVTP AHQHPLGRVL
PGPERVALLA AADAAGTLVV EDDYDSEFRY DVAPVPALAS LDRNRVAYLG TAAKSVAPTL
RLGWLVAPPE LGERVQARRV VTHEGAPWPV QRAYLALLRD GYVDQVVRTA RRVYAERAPR
VAAALAPYAE LAGPLAGMYS TWLLPAGDAV RARDAARGAG FEVNLLADYC RSATLTGLVV
GFGGVTDEEL DRALSALVSA L
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