| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3442 |
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| Symbol | |
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| ID | 4597258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3648978 |
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| End bp | 3650570 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639778048 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_924629 |
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| Protein GI | 119717664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.477749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG TCACCAGCAC CGCCGGCGCG GAGACCACCG CGCCGCCCGG AACGACCCGC
CACCTGGGAT GGGCCCTCGT GCTCATCTCG GTGGCGCAGC TGATGGTGGT GCTCGACGGC
ACCATCGTGA ACATCGCCCT CCCCTACATC CAAGGTGACC TGGGCATCTC CGACGCGAAC
CTGCGCTGGG TCGTGACCGG CTACGCCCTC GCCTTCGGCA GCCTGCTGCT GCTGGGCGGC
CGCCTCGGCG ACCTCTACGG CCGGCGCCGG GTCTTCATGC TCGGCCTGAT CGTCTTCGGG
ATCGCGTCCC TGCTCGGCGG GCTCGCCACC AACGAGCCGC TGCTGCTGGC CGCCCGTGGC
CTGCAGGGCC TCGGCGCGGC GCTCGCCTCC CCGGCGGCCC TCGCGCTGAT CGCCACGACG
TTCCCCGCCG GGCCCGCGCG CAACCGCGCC TTCGGCGTGT ACGCCGCCAT GTCCGGCGTC
GGCGCGGCCG TCGGCCTGCT GCTCGGCGGC TGGCTGACGG GGATGGACAG CGTCCTCGGC
ATGGACGTGG AGGGCTGGCG GCTGACGCTG CTGATCAACA CCCCGATCGG CGTGGCCACG
GCACTCCTGG CGACCCGCTT CCTGCCGGAG TCCGAGACGC ACCCCGGCGA GCTCGACCTG
CCCGGTGCGG TCACCGGCAC GCTCGGCGTG CTCGGCCTCG TCTACGGCAT CAGCCGCGCG
GGGACGGACG GCTGGGGCGA CACCTGGACC GTCGCCAGCC TGGTGGTCGG CGTCGCGCTG
ATCGCGGTCT TCTTGACCCT GGAGCGCCGG GTGGAGCACC CACTGCTGCC GGTGCGCGTG
TTCACCAACC GCACCCGGGC GGCCAGCTTC GTCGCGATGT TCTTCGCCCC GGCAGCGATG
TTCGCGATGT TCTTCTACCT CAGCCAGTAC ATCCAGACCG TGATGGGCTA CAGCCCGATC
AAGGCCGGCG TGGCGTTCCT GCCGTTCGTC TTCGGCCTGA TGGCCGCGGC CGGCATCTCG
TCGAACATGA TCAACCGGGT GGACCCCCGC TTCCTGGCCG GGATCGGCAC CCTGCTGTCG
GCCGGCGCGC TGTTCGGGTT CTCCCGGCTG CCGTACGACA CCTCGTTCCC GGTGACCGCC
GTGCAGGGCA GCTACGCCAC CGACATCTTG CCGTTCATCT TGATGATGTC GTTCGGCATG
GGCCTGGTGT TCGTGCCGCT GACGCTGACC GCGGTGCACC ACCTGCGGGT CGAGGACGCC
GGGATCGGGT CCGGCGTGCT GAACACCATG CAGCAGGTGG GCGGCGCGCT CGGCCTCTCG
CTGCTCGGCA CGATCGCCAC GCAGACCATG GACGACCGCT CGGCCGAGCT GTTCCCGCAG
CTCGCGCAGG CGGCCGCCCA GCTCGACCCG ACCCAGGCGG GGATCCTCCA GAAGGTCGCC
GGCATCGAGA TCTTCACCGA GGGCGCGACC GATGCGTTCC TGCTGGGCGC GGGCCTGATG
CTGCTGGCCT CGCTCGTGAC GTGGGTGTTC CTCAACGTCA AGCACCAGGA GCTCGCCACC
GACGGACCCG AGGCCCCCGT GCACGTGGGC TGA
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| Protein sequence | MTEVTSTAGA ETTAPPGTTR HLGWALVLIS VAQLMVVLDG TIVNIALPYI QGDLGISDAN
LRWVVTGYAL AFGSLLLLGG RLGDLYGRRR VFMLGLIVFG IASLLGGLAT NEPLLLAARG
LQGLGAALAS PAALALIATT FPAGPARNRA FGVYAAMSGV GAAVGLLLGG WLTGMDSVLG
MDVEGWRLTL LINTPIGVAT ALLATRFLPE SETHPGELDL PGAVTGTLGV LGLVYGISRA
GTDGWGDTWT VASLVVGVAL IAVFLTLERR VEHPLLPVRV FTNRTRAASF VAMFFAPAAM
FAMFFYLSQY IQTVMGYSPI KAGVAFLPFV FGLMAAAGIS SNMINRVDPR FLAGIGTLLS
AGALFGFSRL PYDTSFPVTA VQGSYATDIL PFILMMSFGM GLVFVPLTLT AVHHLRVEDA
GIGSGVLNTM QQVGGALGLS LLGTIATQTM DDRSAELFPQ LAQAAAQLDP TQAGILQKVA
GIEIFTEGAT DAFLLGAGLM LLASLVTWVF LNVKHQELAT DGPEAPVHVG
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