Gene Noca_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3425 
Symbol 
ID4597241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3629522 
End bp3630400 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID639778031 
Producthypothetical protein 
Protein accessionYP_924612 
Protein GI119717647 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.39788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACC CGAACTCATC GCGCGGGCTG GTCTCCCCCG TCTCACCGAT CTGGCTGGTG 
CTGATCGGCA TCCTGTCGGT GCAGTTCGGC GCCGGCGTCG CCAAGAGCCT GTTCGACGAG
GTCGCGCCGA CCACCCTCGT GTGGCTGCGG CTGGTCACCA GCGCGGTCGT GCTGCTCGCG
CTCGCGCGGC CGGTGCTGCG CGGCCGGTCC CGGGCGGACT GGCTGGTGGT GCTCGGGTTC
GGCGCCAGCC TCGGGGTGAT GAACTGGGCG ATCTACCAGG CGTTCGCGCG GATCCCGCTC
GGGGTCGCGG TGACCCTCGA GTTCGTCGGC CCGCTCACCC TCGCCGTGCT CGGCTCCCGC
CGCGCCCGCG ACCTGCTGTG GGTGCTGCTC GCGGCCATCG GGGTCGCGCT GCTCGGCCTA
CGCGACGGCG ACCTGACCCT GGCGGGCGTG CTGTTCGCGT TGCTCGCCGG CGCCATGTGG
GCGTCGTACA TCCTGTTGAG CGCGCAGACC GGGCGCCGAT GGCCCGGCTT CGACGGGCTC
GCCCTCGCCT CGGTGGTCGC GACCGCGCTG CTGACGCCCT TCGCCGTCGG GGTCGGCGGG
TCGGACCTGC TGGACCCGCG GATCCTCGCG CTCGGCGCGG TCGTCGGCCT GCTCAGCTCG
GTGGTCCCCT ACAGCTGCGA GCTGGTCGCG CTCCGCTCGC TGCGGCCCTC GGTGTTCTCG
GTGCTGATGA GCCTGGAGCC CGCCGCCGCG GCGCTCGCCG GCATCGTCGT CCTCGACGAG
CTGCTCAGCG CCGAGCAGTG GATCGCCCTG GTGTGCGTGG TCATCGCCTC GGTCGGCGCC
ACCCGCTCCG CACCGACGGC GGCACCGGCA CCGGACTGA
 
Protein sequence
MTDPNSSRGL VSPVSPIWLV LIGILSVQFG AGVAKSLFDE VAPTTLVWLR LVTSAVVLLA 
LARPVLRGRS RADWLVVLGF GASLGVMNWA IYQAFARIPL GVAVTLEFVG PLTLAVLGSR
RARDLLWVLL AAIGVALLGL RDGDLTLAGV LFALLAGAMW ASYILLSAQT GRRWPGFDGL
ALASVVATAL LTPFAVGVGG SDLLDPRILA LGAVVGLLSS VVPYSCELVA LRSLRPSVFS
VLMSLEPAAA ALAGIVVLDE LLSAEQWIAL VCVVIASVGA TRSAPTAAPA PD