Gene Noca_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3420 
Symbol 
ID4598218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3623484 
End bp3624242 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content74% 
IMG OID639778026 
Productbeta-phosphoglucomutase family hydrolase 
Protein accessionYP_924607 
Protein GI119717642 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCCCG TGCGTTCGGT GAGCTGGCCA AGGTACGACG CGGTGCTGTT CGACCTGGAC 
GGTGTGGTGA CGCCCACCGC CGAGGTCCAC ATGCGCGCCT GGTCGGACAT GTTCAACGCG
TTCCTGTCCG CCTACGACGG GCCCGGGGAC GCCGCGCCGT ACACCGAGGT CGACTACTTC
GCCCACGTCG ACGGCAAGCC GCGGTACGAC GGGGTCCGCG ACTTCCTGTC CTCGCGCGGC
ATCGCGCTGC CCGAGGGGAC GCCGGCCGAC CCGGCGTCGG CCGACACCGT CTGCGGCCTC
GGCAACCGCA AGAACGATGC GTTCAACGTC GTGCTCGAGC GCGACGGGGT CGCGGCGTAC
CCGGGCTCGC TCCTGCTGCT GGACCACCTC GAGCAGCTCC GCCTCCCCCT GGGGGTCGTG
TCGTCGTCGG CGAACGCACC GGCGGTCCTG GAGGCGGCCG GCATCGCCGG CCGGTTCGGC
ACCGTGATGA GCGGCACGGT GGCCCACGAG CGCGGGCTGC CCGGCAAGCC GGCGCCGGAC
ACCTTCCTCG CCGCCGCTCA GGACCTCGGC GCATCGGCCG ATCGGACCGT GGTGCTGGAG
GATGCGGTGT CGGGGGTGCG CGCGGGCGCC GCCGGGGGGT TCGGACTGGT GATCGGCGTC
GACCGGGGCG CCGGTCCCGA GACGCTCGCC GCTGCGGGCG CCGACGTCGT CGTCTCCGAC
CTGGCCGAGC TGGTGCCGGG CGCGGGTGAC CTCGCGTGA
 
Protein sequence
MSPVRSVSWP RYDAVLFDLD GVVTPTAEVH MRAWSDMFNA FLSAYDGPGD AAPYTEVDYF 
AHVDGKPRYD GVRDFLSSRG IALPEGTPAD PASADTVCGL GNRKNDAFNV VLERDGVAAY
PGSLLLLDHL EQLRLPLGVV SSSANAPAVL EAAGIAGRFG TVMSGTVAHE RGLPGKPAPD
TFLAAAQDLG ASADRTVVLE DAVSGVRAGA AGGFGLVIGV DRGAGPETLA AAGADVVVSD
LAELVPGAGD LA