Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3336 |
Symbol | gltX |
ID | 4600230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3540928 |
End bp | 3542403 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639777944 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_924525 |
Protein GI | 119717560 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00658512 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAACC AGCCGAAGAC CGTTCGCGTC CGGATGGCGC CCAGCCCGAC CGGGAGCCCG CACGTCGGCC TGGTCCGCAC CGCGCTCTTC AACTGGGCGT TCGCGCGGCA CCACCACGGC ACCTTCGTGT TCCGCATCGA GGACACCGAC CGGGAGCGCA GCACCCAGGA GTCCTACGAC GCGATCATCG ACCTGATGCG CTGGCTCGGC CTGGACTGGG ACGAGGGCCC GGAGGTCGGC GGGCCGCACG CGCCGTACTT CCAGAGCGAG CGCGGCGACA TCTACCGCGA CGCGCTGGCC CGCCTCGCGG AGTCGTCGTA CACCTACGAC TGCTTCTGCA CGAACGAGGA GGTGGACGCG CGCCGCAAGG CCTCCGGCTC GAAGGTGATG GGGTACGACG GCTTCTGCCG CGACCTGTCC ACCGAGCAGC GCGCCGCGTT CGAGGCCGAG GGCCGGCGAC CGGTCGTCCG GTTCCGGATG CCCGACGGGT CGATCACCTG GCACGACCTG GTGCGCGGCG ACGTCACGTT CGAGACCCGG TTCGTGCCCG ACTACGCGCT GTGCCGCGCC AACGGCGATC CGCTCTACAC CCTGGTCAAC CCCGTCGACG ACGCGTACAT GGAGATCACC CACGTGCTGC GTGGCGAGGA CCTGCTCTCC AGCACGCCGC GCCAGATCGC GCTGTACGCC GCGCTCGAGG AGCTCGGCAT CGCGAAGGCG ACGCCGGAGT TCGGCCACCT GCCCTACGTC ATGGGCGAGG GCAACAAGAA GCTGTCCAAG CGGGACCCGG AGGCGCACGC GCTGGCCTAC CGCGACCAGG GCTTCCTGCC GGAGGGCCTG CTCAACTACC TGGCCCTGCT GGGCTGGGCG ATCGCCGCCG ACCGTGACGT CTTCTCGATG GAGGAGATGG TCGCGGCGTT CGACATCGCC GACGTGAACC CCAACCCCGC ACGCTTCGAC ATGAAGAAGG CCGAGGCGAT CAACGCCGCG CACATGCGGC TGCTCTCCCT CGACGTCATG ACCGAGCGGG TGCTCCCGTT CCTCAAGGGC GCCGGCGTGC TGTCCGACCC GGTCAACCCC GCGGACACCC AGCTGCTCGA GCTGGCCATG CCGCTGGTGG CCGAGCGGAT CAACAAGCTC ACCGAGTCCG TGGACATGCT CGGCTTCCTG TTCGTCGACG AGGAGTCGTT CACGCGGGAC GAGGCCGACG CGGAGAAGCT GCTCAACGAC GACGGGCGGG CCGTCGTACG CCGCGCCCTC GACGCGCTCG AGCGAGTCGG GGAGTGGTCG ACGGGCGCCA TCCAGGACGC GCTGCAGGCC GAGCTCGTCG AGGCGATGGG GGTCAAGCCG CGCAACGCGT TCGGTCCGGT CCGGGTCGCC GTGACCGGGC GCCGGGTCTC GCCGCCGCTG TTCGAGTCGA TGGAGCTGCT CGGCCGCGAC CGATCGCTGG CCCGGCTGCG GAGCGCTCTT GGCTGA
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Protein sequence | MNNQPKTVRV RMAPSPTGSP HVGLVRTALF NWAFARHHHG TFVFRIEDTD RERSTQESYD AIIDLMRWLG LDWDEGPEVG GPHAPYFQSE RGDIYRDALA RLAESSYTYD CFCTNEEVDA RRKASGSKVM GYDGFCRDLS TEQRAAFEAE GRRPVVRFRM PDGSITWHDL VRGDVTFETR FVPDYALCRA NGDPLYTLVN PVDDAYMEIT HVLRGEDLLS STPRQIALYA ALEELGIAKA TPEFGHLPYV MGEGNKKLSK RDPEAHALAY RDQGFLPEGL LNYLALLGWA IAADRDVFSM EEMVAAFDIA DVNPNPARFD MKKAEAINAA HMRLLSLDVM TERVLPFLKG AGVLSDPVNP ADTQLLELAM PLVAERINKL TESVDMLGFL FVDEESFTRD EADAEKLLND DGRAVVRRAL DALERVGEWS TGAIQDALQA ELVEAMGVKP RNAFGPVRVA VTGRRVSPPL FESMELLGRD RSLARLRSAL G
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