| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3184 |
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| Symbol | |
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| ID | 4599047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3382733 |
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| End bp | 3384781 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777790 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_924373 |
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| Protein GI | 119717408 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC TCATCAACGC CGAGCTCGTC CGCCTCGATG CGGACCTCGG CGCCGACAAG
CACACCGTGA TCCGGGCGCT GGCCCGGATC GTCGGCGACG CCGGCCGCGC CGGCGACGCC
GACCAGCTCG TGGCGGACGC GTTCGCCCGT GAGGCGACGT CCGCCACCGG CCTCCCGGGC
GGGATCGCGA TCCCGCACTG CCGCACGGCC GGCGTCGCGG AGCCCGTCCT GGCCTTCGCA
CGGCTCCAGC CCGCCGTGGA CTTCGGTGCC AAAGACGGCC CGGCTGACCT GGTGTTCCTG
ATCGCCGCAC CCACCGGCGG TGACAACACC CACCTCCAGC TGCTCACCAA GCTCGCCCGT
GCCCTGGTGA AGCCCGCCTT CACCGACTCG CTGCGCGCGG CCGGGACCCC GGCAGAGGTG
GCCGAGCTGG TCACCGGCGC GATCGGCGCT GCCCCGCAGC CGGCAGCCCC GGCAGCCCCG
GCCGCCTCGG CCGCGCCGCG GCGGCTGGTC GCGGTCACCG CGTGCCCGAC CGGGATCGCC
CACACCTACA TGGCCGCCGA GGCGCTCGAG GCCGCCGCAG CACGGGCCGG GGTGGACCTG
CAGGTCGAGA CCCAGGGCTC AGCCGGCGCG ACGCCGCTGG ACCCGGCCAC GATCGCCGCG
GCCGACGCCG TCATCTTCGC CGTCGACGTC GGCGTGCGCG ACCGACACCG CTTCGCCGGC
AAGCCCCTGG TCTCCTCGGG GGTCAAGCGC CCCTTCGACC AGGCCGACGC GATGATCGCC
GAGGCCCTCC GGTACGCCGA CGACCCGGAC GCCCCGCGCG TCGAGGGCAG CGCGGCCGAC
GCCGCGACGA CGTCTCGCTC GACCGCCGGC GAGAGCTGGG GCGCCCGGAC CCGCCGGGTG
CTGATGACCG GTGTGTCGTA CATGATCCCG TTCGTCGCGG CCGGGGGTCT GCTCATCGCC
CTGTCGTTCC TGCTCGGCGG CTACGAGATC GTCGGGCCCT ACGGCGACAT CGCCGTGAAC
AACACGCTCT TCGACCTGCC GGATCCCGAC GCCCTCGGGC TCGAGCACGC GCTCCTGGGC
TCCGGGCTCG CGGCCTACAT CGGCGCGCTG TTCTTCATCA TCGGCAAGAC GGCCTTCATG
CTCTTCATCC CGGCGCTCGC CGGCTACATC GCGTACGCGA TCGCCGACCG GCCCGGCATC
GCGCCCGGCT TCGTGATGGG CGGTCTGGCG GCGAACATCT TCAACGTGCA GAGCTCGGGT
GACAGCCCCG TCTCGATTCC GGCGACCGGG TTCTTGGGCG CGATCATCGG CGGTGTGCTG
GCCGGCCTGA TCGCGCACTG GGTCGGCGGC CGGCAGGTCC CCGCCTGGAT GCGCGGTCTG
ATGCCGGTGC TGATCATCCC GCTGGTCACC TCGATCGTCG CCGGCCTGTT GATGATCGTG
GTGTTCGGCA AGCCGATCGG CTGGCTGATG GACCAGCTGA ACGACGGCCT GAACTCGCTC
AGCGGCAGCA GCGCGATGGT GCTCGGCGCC ATCCTCGGCC TGATGATGGC CTTCGACATG
GGCGGTCCGC TCAACAAGGT GGCCTACACC TTCGCCGCCA CCGGCGTCGG CGGGGCAGCG
CTCGCGAGCG ACGCGCCGCA GCTGAAGATC ATGGCTGCCG TGATGCTCGC CGGCATGGTC
CCGCCGTTGG CGCTGGCCCT GGCCACCGTC GTCCGCCCCG GGCTGTTCAA CCAGGCCGAG
CGCGAGAACG GCAAGGCGGC CTGGGCCCTG GGCGCGAGCT TCATCACCGA GGGCGCGATC
CCCTTCGCCG CGGCGGACCC GCTCCGCGTC ATCCCGGCCA TCATGTGCGG CAGCGCCGTC
ACCGGCGGCA TCTCGATGGC CCTCGACGTC GGGGTGCGCG CGCCGCACGG CGGGATCTTC
GTGCTCTTCG CCGTCAGCAA CATCCTGGGC TACCTGATCG CGCTCGCGGT GGGCACCCTC
GTCGGCGCCG CGGCCGTCAT CGGCCTGAAG TCCCTCGGCA AGCCCGACCC CGACCTCGCC
ATCGGCTGA
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| Protein sequence | MSDLINAELV RLDADLGADK HTVIRALARI VGDAGRAGDA DQLVADAFAR EATSATGLPG
GIAIPHCRTA GVAEPVLAFA RLQPAVDFGA KDGPADLVFL IAAPTGGDNT HLQLLTKLAR
ALVKPAFTDS LRAAGTPAEV AELVTGAIGA APQPAAPAAP AASAAPRRLV AVTACPTGIA
HTYMAAEALE AAAARAGVDL QVETQGSAGA TPLDPATIAA ADAVIFAVDV GVRDRHRFAG
KPLVSSGVKR PFDQADAMIA EALRYADDPD APRVEGSAAD AATTSRSTAG ESWGARTRRV
LMTGVSYMIP FVAAGGLLIA LSFLLGGYEI VGPYGDIAVN NTLFDLPDPD ALGLEHALLG
SGLAAYIGAL FFIIGKTAFM LFIPALAGYI AYAIADRPGI APGFVMGGLA ANIFNVQSSG
DSPVSIPATG FLGAIIGGVL AGLIAHWVGG RQVPAWMRGL MPVLIIPLVT SIVAGLLMIV
VFGKPIGWLM DQLNDGLNSL SGSSAMVLGA ILGLMMAFDM GGPLNKVAYT FAATGVGGAA
LASDAPQLKI MAAVMLAGMV PPLALALATV VRPGLFNQAE RENGKAAWAL GASFITEGAI
PFAAADPLRV IPAIMCGSAV TGGISMALDV GVRAPHGGIF VLFAVSNILG YLIALAVGTL
VGAAAVIGLK SLGKPDPDLA IG
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