Gene Noca_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3133 
Symbol 
ID4595563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3335177 
End bp3336163 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID639777739 
Producthypothetical protein 
Protein accessionYP_924322 
Protein GI119717357 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCATG GTCCTAGAGT TCGGACCGTG CTTCACGTCG CGGTCGGGAC CCTCCTCGAG 
GCCACCGGCG ACCTTCCCCG GTTCACTGCC GCAAGCCTCC TGACCGGGTG GTCGCTCGAA
CCAGTGTCCT TCGTCCTCAC GATCTGGGTC TCGGGTCTCT ATCTGTACGG GACCCTGGTC
CTGCGCCGCC GCGGCGACCA CTGGCCGATC GGCCGGACGC TGGCCTTCGT CGGGCTCGGC
ATGGGGTCGT TCGCGTTCGC CACCGCATCC GGCCTCGGGA CCTACGACCT GACCCTGCTG
AGCGTGCACA TGGTCCAGCA CATGGTGCTC TCGATGCTGG TGCCGATGGC GCTGGCGATG
GGCGCCCCGG TCACGCTGGC GCTGCGCACC CTGCCGGCCC GCCCCCGGCG GTGGCTCCTC
GCCGTGCTGC ACTCGAGGGT CGCGAAGGTG CTCTCCTTTC CGCCCCTCAC CTTCGCGCTG
TACATCGTCT CGCCGTGGGC GCTCTACTTC ACCGGCTGGT ACTCCGCGAG CCTGCACTCG
GCCTACGTGC ACGAGATGAT GCACGTCCAC CTGGTGCTGG TCGGGGCGCT GTTCTTCTGG
CCGATCCTCG GCATCGACCC GGTGCCCGGA CGGGTCGCCT ACCCGTTCCG GATGCTGCTG
GTGGTGATGA CGCTCCCGTT CCACGCCTTC CTCGGCGTCA CGATCATGGG CCAGGAGGAG
CTCCTCGGCG GATCGTGGTA CCCCGACCTG CACCGGGGGC CGATGGGTGC CTGGCTGCCC
GATCCGGCGG CGGACCAGCA CCTGGCGGGC GGGATCCTGT GGGGCTCGGG CGACCTGGTC
GCGCTCGCGC TGTTCGCCGC GCTGTTCACC CAGTGGGTGC GCTTCTCGCT GAAGGAGGCC
AAGCGCGAGG ACCGGCGCCT GGACCTGCTC GAGGCACGGG AGCGGGCCGC TTCGGGGGAC
GCCCAGTCGC CAGCGGACGC GCCCTAG
 
Protein sequence
MSHGPRVRTV LHVAVGTLLE ATGDLPRFTA ASLLTGWSLE PVSFVLTIWV SGLYLYGTLV 
LRRRGDHWPI GRTLAFVGLG MGSFAFATAS GLGTYDLTLL SVHMVQHMVL SMLVPMALAM
GAPVTLALRT LPARPRRWLL AVLHSRVAKV LSFPPLTFAL YIVSPWALYF TGWYSASLHS
AYVHEMMHVH LVLVGALFFW PILGIDPVPG RVAYPFRMLL VVMTLPFHAF LGVTIMGQEE
LLGGSWYPDL HRGPMGAWLP DPAADQHLAG GILWGSGDLV ALALFAALFT QWVRFSLKEA
KREDRRLDLL EARERAASGD AQSPADAP