Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3080 |
Symbol | |
ID | 4600197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3280256 |
End bp | 3280729 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777686 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_924269 |
Protein GI | 119717304 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.304757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG AGCACCCGAC GATCACGCGG TTCCGTGACG ACCACCGGCG CCGGGGCGGC ACCGGCCAGG TCGTCATCCT GCCCGACTCC GTGCACACCG CCGCGCTGGC CGCCGAGGCG CTCGGCTGCG AGGTGGGCGC GATCGCCAAC AGCCTGCTGT TCGACGCCGA CGGCTCGCCG GTGCTCATTC TGACCTCGGG TGCCCATCGC GTCGACACGA CGAAGGTCGC GGCCGCGCTG GGTGTGACCA AGCTCAAGCG GGCCACGCCG GAGTTCGTGC GCGAGCACAC CGGACAGGCG ATCGGCGGGG TCTCCCCGAT CGGGCATCCG TCGGAGGTCC CGACGTACCT GGACTCGTGG CTGCGCCGGT ACGACGTCGT GTGGGCGGCC GCCGGGCATC CCGCCGCGGT CTTCTCGACG ACGTACGACG AGCTCGCCGC GATGACCGGC GCGCCCACGA TGGAGGTGGA GTGA
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Protein sequence | MTTEHPTITR FRDDHRRRGG TGQVVILPDS VHTAALAAEA LGCEVGAIAN SLLFDADGSP VLILTSGAHR VDTTKVAAAL GVTKLKRATP EFVREHTGQA IGGVSPIGHP SEVPTYLDSW LRRYDVVWAA AGHPAAVFST TYDELAAMTG APTMEVE
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