Gene Noca_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3080 
Symbol 
ID4600197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3280256 
End bp3280729 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content72% 
IMG OID639777686 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_924269 
Protein GI119717304 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.304757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG AGCACCCGAC GATCACGCGG TTCCGTGACG ACCACCGGCG CCGGGGCGGC 
ACCGGCCAGG TCGTCATCCT GCCCGACTCC GTGCACACCG CCGCGCTGGC CGCCGAGGCG
CTCGGCTGCG AGGTGGGCGC GATCGCCAAC AGCCTGCTGT TCGACGCCGA CGGCTCGCCG
GTGCTCATTC TGACCTCGGG TGCCCATCGC GTCGACACGA CGAAGGTCGC GGCCGCGCTG
GGTGTGACCA AGCTCAAGCG GGCCACGCCG GAGTTCGTGC GCGAGCACAC CGGACAGGCG
ATCGGCGGGG TCTCCCCGAT CGGGCATCCG TCGGAGGTCC CGACGTACCT GGACTCGTGG
CTGCGCCGGT ACGACGTCGT GTGGGCGGCC GCCGGGCATC CCGCCGCGGT CTTCTCGACG
ACGTACGACG AGCTCGCCGC GATGACCGGC GCGCCCACGA TGGAGGTGGA GTGA
 
Protein sequence
MTTEHPTITR FRDDHRRRGG TGQVVILPDS VHTAALAAEA LGCEVGAIAN SLLFDADGSP 
VLILTSGAHR VDTTKVAAAL GVTKLKRATP EFVREHTGQA IGGVSPIGHP SEVPTYLDSW
LRRYDVVWAA AGHPAAVFST TYDELAAMTG APTMEVE