Gene Noca_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3046 
Symbol 
ID4600163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp3243408 
End bp3244073 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID639777652 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_924235 
Protein GI119717270 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.307779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGAGA CGCTGCCGAT GTTCCCGCTG AACGCGGTGC TGTTCCCGGG GGTGAGCGTG 
CCGCTCACGG TCTTCGAGGA CCGGTACCGC GCGCTCGTGC ACCACCTGCT GCGCATCGAG 
GACCCCGCCG CGAGGGTGTT CGGGTCCGTG GCGATCCGCG AGGGCTACGA GGTGGGCGAG 
CACGGCGCCC AGTCGCTGTA CCGGGTCGGC TGCCGGGTGC AGCTCACCGA GGTCGAGGCG 
CATCCCGACG GCAGCTTCGA CGTCGTGGCG GTGGGCCTGG AGCGGATCCA GCTGGACCGC 
CTGGACACCA CCGGGCTGTT CCCGGTCGGC CACGTCACCG ACCGGCCGGA CCCCGAGGCG 
CCGGTCGCCG AGGCGGTCCT CGACCAGGCC CGGGTCGCGT TCACGGCCTA CCGCGCGGCC 
TTGGCCGACA TCCGGGCCGA CCCGTACGCC GGCGCGCTGC CGCGGGACCC GACGTACCTC 
TCCTGGACGC TGGCCGCCGT CGCGCCGCTC CCGATGCCCG AGCGCCAGTC GCTGCTCGAG 
GCGGAGGACG CCGAGACCCG CCTGGTGCTG GTCACCGATC TGCTGCGCGC CGAGCTGCGC 
GCGATGAACG TGATCCCCTC GCTCCCGGCC ACCGAGGTGG CCCGGACCCG GTGGAGTCCC 
AATTGA
 
Protein sequence
MPETLPMFPL NAVLFPGVSV PLTVFEDRYR ALVHHLLRIE DPAARVFGSV AIREGYEVGE 
HGAQSLYRVG CRVQLTEVEA HPDGSFDVVA VGLERIQLDR LDTTGLFPVG HVTDRPDPEA 
PVAEAVLDQA RVAFTAYRAA LADIRADPYA GALPRDPTYL SWTLAAVAPL PMPERQSLLE 
AEDAETRLVL VTDLLRAELR AMNVIPSLPA TEVARTRWSP N