| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3021 |
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| Symbol | gltD |
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| ID | 4596469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3218119 |
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| End bp | 3219600 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639777627 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_924210 |
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| Protein GI | 119717245 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0349235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACC CCCGCGGATT CTTGAAGAAG GGCCGGGAGG TCGCCGCGCG GCGCCCGGTC
GAGGAGCGGA TCCAGGACTG GAACGAGGTC TACCCGGGCT CCGCCGGCCG GGCCCTGCTC
CCGATCATCA CCGAGCAGGC CGGGCGTTGC ATGGACTGCG GCATCCCGTT CTGCCACCAG
GGCTGCCCGC TGGGGAACAT CATCCCCGAG TGGAACGACC TGGTCTGGCG CGACGACTGG
GAGGGCGCGA TCGAGCGCCT GCACGCGACC AACAACTTCC CGGACTTCAC CGGCCGGCTC
TGCCCGGCGC CCTGCGAGAC GGCCTGCGTG CTCGGCATCA ACCAGGATCC GGTGACGATC
AAGAACGTCG AGGTCGCGAT CATCGACAAG GCGTGGGACT CCGGGTTCGT GCGCCCGCAG
CCGCCGGAGT GGCTCTCGGG TCGCACCGTC GCCGTGGTCG GCTCCGGCCC GGCCGGCCTG
GCCGCCGCTC AGCAGCTGAC CCGCGCCGGG CACACGGTCG CGGTCTACGA GCGCGCCGAC
AAGATCGGCG GGCTGCTGCG CTACGGCATC CCCGAGTTCA AGATGGAGAA GCAGCACCTC
GACAAGCGCT TGGAGCAGAT GCGCCGGGAG GGGACCGTCT TCCGCTCCGG CGTGGAGGTC
GGCGCGGAGC TGACCGGCGA CCAGCTGCGG GACCGCTACG ACGCCGTCGT CCTCGCGATC
GGCTCCACGG TGCCGCGCGA GCTGCCGGCC CCCGGCCGCG AGCTGCGCGG CATCCACCAG
GCGATGGACT TCCTCCCGCA GGCCAACCGG GCCGCGCTCG GCGAGGAGGT CGACGGGCAG
ATCACCGCGA CCGGCAAGCA CGTGGTGATC ATCGGCGGCG GCGACACCGG TGCGGACTGC
CTCGGCACCT CCACCCGCCA GGGAGCCGCG TCGATCACGC AGCTGGAGAT CATGCCCGAG
CCGCCCGAGT CGCGTCCGGC CGGCCAGCCG TGGCCCACGT ACCCGATGGT GTTCCGGATC
TCCTCGGCCC ACGAGGAGGC CGCGCACCAG AACCTGCAGA GCCGGGTGTA CGCCGTCTCC
ACGAAGGAGT TCCTCGGCGA CCAGGACGGC AACGTCCGGG CGCTCAGGCT GGTCGAGGTG
CGCCTCGAGG ACGGCCGGTT CGTCGAGGTC GAGGGCTCCG AGCAGGAGAT CCCGGCCGAG
CTGGTGCTGC TCGCGATGGG CTTCACCGGT CCGCAGCAGG CCGGCCTGGT CGAGCAGCTC
GCCGTGGACC TGGACGAGCG GGGCAACGTG GCCCGGGACG CGGCGTACAT GACGTCGGTC
GACGGCGTCT TCGTCGCCGG TGACGCCGGC CGCGGCCAGT CGCTGATCGT CTGGGCGATC
GCCGAGGGCC GGGCCGCGGC CGCCGCGGTG GACACCTACC TGACCGGCTC CACGACGCTG
CCCGCGCCGA TCCCGCCCAC CGAGCGCCCG CTGGTGGTCT GA
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| Protein sequence | MADPRGFLKK GREVAARRPV EERIQDWNEV YPGSAGRALL PIITEQAGRC MDCGIPFCHQ
GCPLGNIIPE WNDLVWRDDW EGAIERLHAT NNFPDFTGRL CPAPCETACV LGINQDPVTI
KNVEVAIIDK AWDSGFVRPQ PPEWLSGRTV AVVGSGPAGL AAAQQLTRAG HTVAVYERAD
KIGGLLRYGI PEFKMEKQHL DKRLEQMRRE GTVFRSGVEV GAELTGDQLR DRYDAVVLAI
GSTVPRELPA PGRELRGIHQ AMDFLPQANR AALGEEVDGQ ITATGKHVVI IGGGDTGADC
LGTSTRQGAA SITQLEIMPE PPESRPAGQP WPTYPMVFRI SSAHEEAAHQ NLQSRVYAVS
TKEFLGDQDG NVRALRLVEV RLEDGRFVEV EGSEQEIPAE LVLLAMGFTG PQQAGLVEQL
AVDLDERGNV ARDAAYMTSV DGVFVAGDAG RGQSLIVWAI AEGRAAAAAV DTYLTGSTTL
PAPIPPTERP LVV
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