Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2972 |
Symbol | |
ID | 4595610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3157226 |
End bp | 3158461 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639777577 |
Product | phage integrase family protein |
Protein accession | YP_924161 |
Protein GI | 119717196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGCGTG ATCTCGAACA ACTGCAGATT GAGCGCTTGG GTTGCGTTCG CTCCGGTGGC TCCGGTGTTG CCTGGCTGGT CTACGACGAC GCGGGCGATG CGGTTCGCCC GATCGCGGAG TTCCTCCGGG ACTTCGCAGC GCGGGGCAAT AGTCGGGGCA GCGTGCGGTC CTATGCCTAT GGGCTGCTTC GGTGGTGGCG CTGGCTCGCG GCGGTCGGCG TGGAGTGGGA CCGAGCCACC CAAGCAGAAG TACGTGACCT GACATTGTGG CTGCAGTTGC ATCCTAAGCC GCGCCGGTCA CAGCGGACCG TCTCAGCAGC GACAGCCGGG ACGGTGAACC AGGTGACCGG CAAGCGCTAC CTGGACGACC ACTACGCGGC ACGTACGATC CGGCACAGCA ACGCGGTGGT CTCCTCGTTC TACGAGTTCT GGGGCGAGCA GGGGTTGGGT CCGGTGGTGA ACCCGGTGGC GCGCGACCAT CGCGGCCAGG GACGTTCGAA CGCGCATCAC AACCCGATGG AGCGGTTCCG TCCCGAGGGT CGGGTCCGGC ACAACCCGAA GGTCCCGCGG CGTCAGCCGC GGGCGCTGCC GGACCAAGCC TGGGCAAATC TGTTCGACGC GATGGGCTCG AACCGGGACC GTGCGCTGCT GGCGTTGGCA ATCAGCAACG GCGCCCGCGC GGCGGAGGTC CTCGGCCTGC GCGGCTGCGA CGTGGACTGG GGCAACCAGC AGGTCCGGGT GATCCGCAAG GGCAGCCGTG CCGAGCAGTG GCTGCCGGGC AGCAACGACG CGTTCGTGTG GCTGCGGCTC TATCTGGCCG AGATCGGTGG CGTCGGCCCG GCTGACCCGC TGTGGGTGAC GCTGCGCAGA CGACGTGACG CCGACGGCAA GTTGGCCCGG ATCCCGTTGA GCTACGAGGC GCTTCGGGCG GTGCTGCGCC GCGCAAACGC GAAGCTGGGC ACCAACTGGA GCATGCACGA CCTGCGCCAC ACCTGCGCGT TGCGGATGGC CGCCGACGAG CACGTCTCGC TGCGCGACGT CCAGACGATC CTGGGCCATG CCCACCTGGA AACGACCGCG GAGATCTATC TCGTCGAGGA CGAGCGCCAC ACCGTGGAGC GGGTCGCCGA ACACCTGGCC CGTCTGGCCA AGCCGAAGCC AGCCCCGGAG CCTGTCGACC GCGGCTACCG GGCCGCCGAC CTGGCGGTGC TGTTCGGTGA CGGGGTACTG CCTTGA
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Protein sequence | MSRDLEQLQI ERLGCVRSGG SGVAWLVYDD AGDAVRPIAE FLRDFAARGN SRGSVRSYAY GLLRWWRWLA AVGVEWDRAT QAEVRDLTLW LQLHPKPRRS QRTVSAATAG TVNQVTGKRY LDDHYAARTI RHSNAVVSSF YEFWGEQGLG PVVNPVARDH RGQGRSNAHH NPMERFRPEG RVRHNPKVPR RQPRALPDQA WANLFDAMGS NRDRALLALA ISNGARAAEV LGLRGCDVDW GNQQVRVIRK GSRAEQWLPG SNDAFVWLRL YLAEIGGVGP ADPLWVTLRR RRDADGKLAR IPLSYEALRA VLRRANAKLG TNWSMHDLRH TCALRMAADE HVSLRDVQTI LGHAHLETTA EIYLVEDERH TVERVAEHLA RLAKPKPAPE PVDRGYRAAD LAVLFGDGVL P
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