| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2917 |
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| Symbol | |
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| ID | 4597418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3097623 |
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| End bp | 3099620 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777522 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_924106 |
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| Protein GI | 119717141 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | [TIGR01746] thioester reductase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0126943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTACT TCGTGACGGG GGCCACAGGG TTCATCGGCC GGCACCTGGT CCGGGAGCTG
ATCGACCGCC GGGACGGTGA GATCCACGTC CTGGTCCGCG CGGGCTCGTT GCACCGCATG
GAGGCGCTGA TCGCGCGCTG GGACACCGAC CGGGTGGTGC CCGTCGTCGG TGACCTGGCC
GCCGACGCGC TCGGCGTCGA CCCGGCGTGG GTGGCCGAGC ACCGTGGCGA GATCGACCAC
TTCTTCCACG TCGCCGCGAT CTACGACATG ACCGCGGACG ACGAGACCAA CGAGACGATG
AACGTCGGCG GCACCCGCAA CGCGCTGGCG CTCGCCGAGG CGCTGGACGC CGGCTGCTTC
CACCAGGTGT CCTCCGTGGC CGCGGCCGGG GAGTACCGCG GCCGCTTCGA CGAGACGATG
TTCGACGAGG GGCAGCACCT GCCCTCGCCG TACCACCGCA CCAAGTTCGA GTCCGAGCGG
ATCGTGCGCG AGGAGGGTGG AGTGCCCTGG CGGGTCTACC GCCCCGCGAT CGTGGTCGGC
GCCTCCGACA CCGGCGAGAT GGACAAGGTC GACGGGCCCT ACTACTTCTT CGCCGCGATG
AAGGCGATGC GCGACCGGCT CCCCTCCTGG CTGCCGCTGG TGGGCGTCGA CCTCGGCGAC
ACCAACGTCG TCCCGGTCGA CTACGTCGCG GCGGCGATCG ACCACCTCGC GCACGTGCCC
GACCGCGACG GCGAGGCGTT CCACCTGGTC AACCCCGAGC CGCAGCCGGT GGTGGACATG
GTCAACGCGT TCTGCGCCGC GGCCGGGGCG CCGCGGTTCG CGACGCCGCT GGACCGTGGC
CTCACCCGGC GCCTGCCGGA GGCGCTGAGG CCGGCCGGCC TGCTCAACAC GCTGGCCAAG
AACGGCGCCG TGCAGTCGGC CCTCGACCTG GTGACCAGCC GGGTCGGCGT ACCGGCCGAG
GTGCTCGCGC ACACGTCGTT CACGGCGGTC TTCGACTCCC GGCGCACCGA GCAGGCGCTG
GCCGGGTCCG GCATCGGCGT CCCCGACCTC GAGTCCTACG CCCGCACCCT GTGGACCTAC
TGGGAGGAGC ACCTCGACGA GTCCACGGGG CGCGACGCGC GGGTGCGCGA GAAGCTCCAT
GGCAAGTACG TCGTCGTCAC CGGCGCCTCC TCCGGGATCG GCAAGGTCAC CGCGCTCAAG
GTCGCCCAGG CCGGCGGCAC CCCGGTCCTG GTCGCCCGCG GCAAGGAGAA GCTGGACGAG
CTGCGCGGCC TGATCGAGTC CCGCGGCGGC ACCGCCATCG TGCAGCCCTG CGACCTCTCC
GACCTCGAGG CCATCGACGC CCTGTGCGAG ACGCTGACGA CCGAGTTGCC GTCGATCGAC
TTCGTCGTCA ACAACGCCGG CCGCTCGATC CGCCGCTCGC TCCGGCTCTC GCAGGACCGC
TTCCACGACT TCGAGCGGAC CATGCAGCTC AACTACTTCG GGGCGGTGCG CCTGGTGATG
GGGCTGATCC CCGCCATGCG CGCCAACCGC AGCGGGCACG TCGTGAACAT CTCCTCGATC
GGGGTGCAGA CGAACCCGCC GCGGTTCTCG GCGTACGTCG CCTCCAAGGC CGCGCTCGAC
TCCTGGAGCA ACGTGGTCTC CTCCGAGCTG GTCGGCGACG GGATCACGTT CACCAACATC
CACATGCCTC TCGTGCGGAC GCCGATGATC GCCCCGACCA AGCTCTACGA CAAGTTCCCC
ACGATCTCAC CCGCGCAGGC AGCGGACCTG GTGATCGAGG CGATGGTCGA GCGTCCCCAC
GAGATCAACA CGCTGCTCGG CAACGCGGGC GCCGTCGCCC ACACGCTCAC CCCGAAGCTC
GCGTTCCGGG TGCTCAACCT GGCCTACCAC GTGTTCCCGG ACTCGGCGGC CGCTCAGGGG
AGGACACCCG GCGAGGGCGG CACCCGCGAG TCGGAGCAGA TCATGCTCGC GAAGGTGTTC
AAGGGCGTGC ACTGGTAG
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| Protein sequence | MSYFVTGATG FIGRHLVREL IDRRDGEIHV LVRAGSLHRM EALIARWDTD RVVPVVGDLA
ADALGVDPAW VAEHRGEIDH FFHVAAIYDM TADDETNETM NVGGTRNALA LAEALDAGCF
HQVSSVAAAG EYRGRFDETM FDEGQHLPSP YHRTKFESER IVREEGGVPW RVYRPAIVVG
ASDTGEMDKV DGPYYFFAAM KAMRDRLPSW LPLVGVDLGD TNVVPVDYVA AAIDHLAHVP
DRDGEAFHLV NPEPQPVVDM VNAFCAAAGA PRFATPLDRG LTRRLPEALR PAGLLNTLAK
NGAVQSALDL VTSRVGVPAE VLAHTSFTAV FDSRRTEQAL AGSGIGVPDL ESYARTLWTY
WEEHLDESTG RDARVREKLH GKYVVVTGAS SGIGKVTALK VAQAGGTPVL VARGKEKLDE
LRGLIESRGG TAIVQPCDLS DLEAIDALCE TLTTELPSID FVVNNAGRSI RRSLRLSQDR
FHDFERTMQL NYFGAVRLVM GLIPAMRANR SGHVVNISSI GVQTNPPRFS AYVASKAALD
SWSNVVSSEL VGDGITFTNI HMPLVRTPMI APTKLYDKFP TISPAQAADL VIEAMVERPH
EINTLLGNAG AVAHTLTPKL AFRVLNLAYH VFPDSAAAQG RTPGEGGTRE SEQIMLAKVF
KGVHW
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