Gene Noca_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2880 
Symbol 
ID4596329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3062418 
End bp3063848 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content74% 
IMG OID639777485 
Productcobyric acid synthase 
Protein accessionYP_924069 
Protein GI119717104 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCC TGCTCGTCGC CGGTACCACC TCCGACGCCG GCAAGTCGGT GGTGACGACC 
GGCCTCTGCC GGGCGTTCGC ACGACGCGGG GTACGGGTGG CGCCGTACAA GGCGCAGAAC
ATGTCGAACA ACTCGATGGT GTGCGCGGGC CCGGACGAGC GGCTGGCGGA GATCGGTCGG
GCCCAGTGGG TCCAGGCGCT CGCAGCACGG GCGACGCCGG AGCCCGCGAT GAATCCGGTT
CTCCTCAAGC CGGGCTCGGA CCGGCGCAGC CACGTCGTGC TCCTCGGGAG ACCCGCGGGT
GAGGTCTCGT CGGCGAGCTG GGAGGAAGGC CGGCGCCACC TGGCCGAGGC AGCCCACGAG
GCCTTCGACG ACCTCGCCTC ACGCTACGAC GTGATCGTGG CCGAGGGCGC GGGCAGTCCG
GCAGAGATCA ACCTGCGCGC AGGCGACTAC GTGAACATGG GCCTGGCCCG TCACGCCGCC
CTCCCGACCG TCGTGGTCGG CGACATCGAC CGGGGCGGCG TCTTCGCCGC ACTGCACGGC
ACGGTGGCGC TCCTGGCACC CGACGATCAG GCGCTGGTCG CCGGCTTCGT GATGAACAAG
TTCCGCGGCG ACCTCTCCCT GCTCTCCCCC GGCTTGGAGA TGCTTCGGCT CGCGACCGGC
CGGCCGACGT ACGGCGTCCT GCCGTGGGAC CCGAGCCTGT GGCTCGACTC CGAGGACGCG
CTGGACCTCG ACGGCCGCCG CTCGGCCGGG AGCGGCGCGA AGCGGGTCGC CGTCGTACGA
CTCCCCAGGA TCAGCAACTT CACCGACCTC GACGCCCTCG GCCTCGAGCC CGACCTCGAC
GTCGTCTTCG CCTCCTCGGC GCGGGACCTC GCCGACGCCG ACCTGGTCGT GCTCCCCGGC
ACCCGCGCGA CCGTCGCCGA TCTCGCCTGG ATGCGCGCGC GCGGCCTCGA TGGCGCGATC
ATCGCCCACG CGGACGCCGG TCGGGCGGTG CTCGGCATCT GCGGCGGCTG CCAGATGCTG
GGCCGCACGA TCACCGACCC CGCGGGCATC GAGGGTGACC CGGGCACCGT GGTCGCGGGT
CTCGGGCTGC TCCCCCACAC CACCACGTTC GGCGCCGACA AGGTGCTGCG CGTCCACGAG
CCCGCAGGCT ACGAGATCCA CCACGGACGG ATCGCCGGCC GCACCGAGGA CGGCCTCGTC
AGCGGCACGA TGGTGCACGG GTCCCTCGAG GACGACGCCC ACCGCGCGGC CTACCTCCAG
CGCGTCCTCG GCGTCACGTC ACGGGCCTCC TTCCCCGCCG CCCGCGACGC CCGGATCGAC
CTGCTCGGCG ACCTCGTCGA GCAGCACCTC GACGTCGACG CGCTGCTCGC CCTCGCCGTC
TCCGGCGCGC CCGCCGGCCT GCCGGTCCTG CCGCCCGGCG GCGTGCCGTG A
 
Protein sequence
MSGLLVAGTT SDAGKSVVTT GLCRAFARRG VRVAPYKAQN MSNNSMVCAG PDERLAEIGR 
AQWVQALAAR ATPEPAMNPV LLKPGSDRRS HVVLLGRPAG EVSSASWEEG RRHLAEAAHE
AFDDLASRYD VIVAEGAGSP AEINLRAGDY VNMGLARHAA LPTVVVGDID RGGVFAALHG
TVALLAPDDQ ALVAGFVMNK FRGDLSLLSP GLEMLRLATG RPTYGVLPWD PSLWLDSEDA
LDLDGRRSAG SGAKRVAVVR LPRISNFTDL DALGLEPDLD VVFASSARDL ADADLVVLPG
TRATVADLAW MRARGLDGAI IAHADAGRAV LGICGGCQML GRTITDPAGI EGDPGTVVAG
LGLLPHTTTF GADKVLRVHE PAGYEIHHGR IAGRTEDGLV SGTMVHGSLE DDAHRAAYLQ
RVLGVTSRAS FPAARDARID LLGDLVEQHL DVDALLALAV SGAPAGLPVL PPGGVP