| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2863 |
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| Symbol | |
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| ID | 4598462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3037709 |
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| End bp | 3041107 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639777468 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_924052 |
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| Protein GI | 119717087 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG GCGTCCTCGG CACCACCGTG GCCGCCGACG CCTCCGGGCC GGTCGGCCTG
GGCGGCCCCA AGCAGCGCGC GCTGCTCGCC GCGCTGGCTC TGCACCGCGG CCGCGCGGTC
GCCATCGACA CGCTCACCGA CCTGGTCTGG GCCGGCGCGC CGCCGCCGGG CGTCGCCGGG
ACGCTGCAGG GGTACGTCGC CGGGCTCCGC CGGGCGCTCG AGCCGGACCG GACCTCGCGC
GGCGGCGGGA CCCTGCTGGT GACCGAGCAG CCCGGGTACG CCCTCCGGCT GCCGGAGGAG
GACCTCGACA CCGCCGCGTT CGAGCACGCG GTCACCACCG CGCACGGCCG GGTCGCCCCC
CTCGCCGACG CGCTCTGCCG GGGCCGCGAC CTGCCGCCCG GCTCCCCCGA CGCAGCCGGC
CTCGGTGCCC TGCACACCAC CCTCGACGAG GCGCTCGCGC TCTGGCGCGG GGTCCCCTTC
GCAGATCTCG GCGAGGTGCC GGCGGCGGAG GCCGAGCGTG CCCGCCTCGA GGAGCTGCGG
GTCCTCGCCA ACGAGGACCG CTCCGCTCTC GGCATCCTGC TCGGGCTGCA TGCCACGGTC
GCGGCGGAGC TGGACGCGCT CACCCGCCAG CATCCCCTGC GCGAGCGCGC CTGGGCGCTG
CGCGCGCTCG CGCTGGCCGG GTCGGGCCGC CAGGCCGACG CGCTGGCGGT GCTGCGCCAG
GTCCGCGACG TCCTCGACGA GGAGCTCGGC CTGGAGCCGG GGGCCGAGCT GCGCGCAGTG
CAGGCCGCCG TGCTCCGGCA GGAGTCGACG GCGCTCCCCG ACCCCGCACC GGCGCCCGGC
CCGGCAACGG CGGCCCGGGC GTCGACCGGC CCGCAGGTCC ACGCCGCGCT GCCGTTCCCG
ACGCTGTGGG GATGGTCCCT GGCCGGCCGC GCCGACGAGC TCGCCGCCCT CACCGACCTG
GTCGACCGGG TGGTCGCCGG CACCGACCGG TCGCCGTCGT TCGTCGCGCT GACCGGCGAG
CCCGGGATCG GCAAGAGCCG GCTCTCGATC GAGGCGGCGA CGTACGCCGA CGCGCACGGG
ATGACGATCG CGTGGGGGCG CTGCTCACAG GACGACGGCG CCCCGGCGCT GTGGCCCTGG
GCCACCGTCC TCGAGCGGCT CGGGTCCGAG CTGCCGACCA GTGGCACCGA CGACGACGGC
GGCGCGGCGT TCCGGGCCTG GGAGACCGTG GTCGAGTCGG TGCTCGCGGC GGCGACCGCG
GGCCCGCTGA TGCTGGTGCT CGACGACCTG CACTGGGCGG ACACCTCCAG CCTCCGGGTG
CTGCGCCTGC TGACCGAGGC CGCGGTCGCG GAGGGTCCCG GGCCGCGGCT GCTGGTGCTC
ACCACCTGGC GCGAGCACCC GCCGCCGACC GGGGCCCTGG CCGAGGTCGC CGAGGCGCTG
GCCCGCAAGC ACGCCCTGCG GATCCAGCTG CGCGGGATCC CCGCGGAGGC GGCCGCGCAG
GTGTTCGCCC AGATCACCGA GTCCGAGCCC ACCGAGGCCG AGACCGACGC GCTGCGCCGG
CGTACCGAGG GCAACCCGTT CTTCCTCGTC GAGTACGCGC GCCTGGCCCG CGAGCGCGGG
GACGTGGCCG CGCTGATGGC CGAGCCGCAG CCCCCGGCCG CCGTGCACGA GGTGCTCTCG
CGGCGGCTCG CCCAGCTCGA CGAGCCGACC CGCGAGCTGC TCCAGGTCGC GAGCGTGCTC
GGCCGGATCT TCGAGCTCGG GACCCTCGCC GGCACCGCCG ACCAGGACGA CGATCAGGTG
CTCGACCGGC TCGACCCGGC GCTGGCCGCG GGCCTCGTCG AGGAGGACGG CGTCGACCGG
TTCCGGTTCA CCCACGCGCT GGTGCGCGAC ACCGTGCGCT CGAGCCTGCC GCAGTCGCGC
CGGGCCAGGG TGCACGCGCG CGCCGCACGC GTGCTCGCCG GGCGGAACGG TCACGAGGCC
GAGATCGCCC GGCACTGGCT GGCCGCCGGC CCGCGGCACC TGGCCGACGC CTGGCCCGCG
GCCCAGGCGG CCGCCCGCTC CGCGACCGCC GTCTTCGCGT ACGTCGAGGC GCTCGAGATG
CTCGAGCACG CGCTGCGCGC GCAGGACCAG GACCCGGGGT CGGACGACCG GTCCCGCTTC
GAGCTGCTGA CCGACCTCGC CGAGGTGCTG CGCCGGGCCG GCCGATGGAT CGAGCTGCGC
GGGGTCGCCC ACGAGGCGAT CGAGGTCGCC GACGAGCTCG GCGACCCGGA CCTGCTCGGC
CGGGCCGGGA TCATGACCAG CACCGGCGCC CTGTGGCAGG CCGCAGCGCA CGCCCAGGTC
GACCCGATGG TGGTCGCCGC GCTGCGCCGC GCGCTGGACC GTCTGCCCGA CGGCGACTCC
CCGGCCCGCT GCCGGGTGAT GCTCGGGCTC GCCGGGGAGA TCTACTACGG CGCCACCCCG
CAGGAGCGCG AGGCGATCTC CGCCGAGGCC GTCGCGATGG CCCGTCGGCT CGGCGACCCC
GCGCTCACGC TGAGCGCCTG CCTGCACGCG GCCATCGCGG TCTGGCGCGC CGGTACGGCG
CAGCTGCGGC TCGACCTGAC CACCGAGGCG GTCGGTCTGG CCGAGCGGCT CGGCGACGGC
ATCTCACTCT GCTCGGCGCT GACCCTGCGC GCGGTCGCGG CAGGCGAGCT CGGCGACGTC
ACCGTCCTCG ACGAGAGCCT GTCCCGGGCC CGCGCCGAGG CGGACCGGCT GCGGCACATC
TACGCCCAGC TGGTGCTGGA CTCCCTCGAG GTGTCGTGGG CGGCGATGCA GGGCCGTTTC
GACGAGGTCG AGAAGATCAT CGAGCACATG CAGGGCATCG GCGAGGTCGT GTCGATCACC
GGCTACGAGG AGGCCGTCGC CGGCGCGCTC CTGATGCAGC TGCTCTGGCA GGGACGCGAC
GACGAGCTCT CCTTGGCGAT GACGGCGATG GAGGGCAATA CGTTCCTGCC GATCGCCACC
TCGATCGTCG CGGTGCAGTG CCGCACCGGC CACCTCGACG TGGCCCGGAC CTACTTCGAG
GGCCACCGGG AGGACGTCGG CCTGGCCATG GCCTCCGACA CCTGGTTCTC CCCCATGGCC
TGGAGCATGG GCGCCGAAGC GGCCTGCTAC CTGGGCGACG CCCAGCTCGG CGCGACGGCG
TACCAGTGCC TCGCCGACCT CACGGGCCGG CCGGCGTGCG CCGGCTCCGG GTCGGCGATC
GGGCCGGTCG ACATGTTCCT CGCGATGGCC GCCCACGCCA CCGGGGAGGA CGACCTGGCC
GCCCGGCACG CCGACCGCGC GCTCGAGCTG TGCGCGACGT GGGACGTGCC GCTCGCGGCG
GACTGGGTCC GCCGCGAACG GGAGCGGTTC TCCTTCTAG
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| Protein sequence | MRIGVLGTTV AADASGPVGL GGPKQRALLA ALALHRGRAV AIDTLTDLVW AGAPPPGVAG
TLQGYVAGLR RALEPDRTSR GGGTLLVTEQ PGYALRLPEE DLDTAAFEHA VTTAHGRVAP
LADALCRGRD LPPGSPDAAG LGALHTTLDE ALALWRGVPF ADLGEVPAAE AERARLEELR
VLANEDRSAL GILLGLHATV AAELDALTRQ HPLRERAWAL RALALAGSGR QADALAVLRQ
VRDVLDEELG LEPGAELRAV QAAVLRQEST ALPDPAPAPG PATAARASTG PQVHAALPFP
TLWGWSLAGR ADELAALTDL VDRVVAGTDR SPSFVALTGE PGIGKSRLSI EAATYADAHG
MTIAWGRCSQ DDGAPALWPW ATVLERLGSE LPTSGTDDDG GAAFRAWETV VESVLAAATA
GPLMLVLDDL HWADTSSLRV LRLLTEAAVA EGPGPRLLVL TTWREHPPPT GALAEVAEAL
ARKHALRIQL RGIPAEAAAQ VFAQITESEP TEAETDALRR RTEGNPFFLV EYARLARERG
DVAALMAEPQ PPAAVHEVLS RRLAQLDEPT RELLQVASVL GRIFELGTLA GTADQDDDQV
LDRLDPALAA GLVEEDGVDR FRFTHALVRD TVRSSLPQSR RARVHARAAR VLAGRNGHEA
EIARHWLAAG PRHLADAWPA AQAAARSATA VFAYVEALEM LEHALRAQDQ DPGSDDRSRF
ELLTDLAEVL RRAGRWIELR GVAHEAIEVA DELGDPDLLG RAGIMTSTGA LWQAAAHAQV
DPMVVAALRR ALDRLPDGDS PARCRVMLGL AGEIYYGATP QEREAISAEA VAMARRLGDP
ALTLSACLHA AIAVWRAGTA QLRLDLTTEA VGLAERLGDG ISLCSALTLR AVAAGELGDV
TVLDESLSRA RAEADRLRHI YAQLVLDSLE VSWAAMQGRF DEVEKIIEHM QGIGEVVSIT
GYEEAVAGAL LMQLLWQGRD DELSLAMTAM EGNTFLPIAT SIVAVQCRTG HLDVARTYFE
GHREDVGLAM ASDTWFSPMA WSMGAEAACY LGDAQLGATA YQCLADLTGR PACAGSGSAI
GPVDMFLAMA AHATGEDDLA ARHADRALEL CATWDVPLAA DWVRRERERF SF
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