Gene Noca_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2850 
Symbol 
ID4598449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3020188 
End bp3021078 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content74% 
IMG OID639777455 
Productpalmitoyl-CoA hydrolase 
Protein accessionYP_924039 
Protein GI119717074 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGGG GAGCGTCGGG CCCGACCGCG GAGCTGGTCG GGCTGCTCGA CCTGGAGCGG 
ATCGACGCCG ACCTGTTCCG CGGCGGGCAG CCGGACTCGG TCCGGGCCCG GGTCTACGGC
GGCCAGGTCG CCGCCCAGGC GCTGGTCGCG GCGACCCGCA CCGTGGAACC GGCGTACGCC
GTCCACTCGC TGCACTCCTA CTTCCTGCTG CCCGGCGACT ACTCGGTGCC GATCGTCTAC
GACGTCGAGC GGATCCGCGA CGGGCGGTCC TTCCAGACGC GGCGGGTGAT CGCGCGCCAG
CACGGGCGGG CGATCTACTT CCAGGTGCTG GACTTCCAGC GTGCCGAGGA GGGCTTCGAG
CACCAGGACG CGATGCCCGA GGTGAAGCCG CCGGAGGAGG GCCTCGACCT GGTCGACGTC
ATGCGTCGCG GCGGCAACGC CGAGGCGGAC GCCCTCGGCA AGGAGTGGGG CGCGCTCGAC
GTGCGCTGGC TCGGCAACTC GCGGTTCGGT CTCGAGGCCG ACCCGGACCG CCCCTCCCAG
GCCCGGATGT GGGTGCGGCT CAAGGAGGGG CTCGGCGACG ACCCGGTCGT CCACCTCGCG
GCGTTCACCT ACGCCAGCGA CGTGAGCCTG CTCGGCTCGA CGCTCGCCGC GCACGGCGTG
AACCCCTCGA AGACGCAGAT GGCGTCGCTG GACCACACGA TCTGGTTCCA CCGGCCGTTC
CGCGCGGACG AGTGGTGGCT CTACGACCAG GTCTCGCCCG CGGCGGTGGG TGCCCGCGGG
CTGGCCTTCG GCCGGATCTT CACCCAGGAC GGCACCCTGG TCGCCACGGT CGCGCAGGAG
GGCCTGATCC GGCCCCGGGG CGAGGGGTAC GCCGGACCCG GCATGGCCTG A
 
Protein sequence
MSGGASGPTA ELVGLLDLER IDADLFRGGQ PDSVRARVYG GQVAAQALVA ATRTVEPAYA 
VHSLHSYFLL PGDYSVPIVY DVERIRDGRS FQTRRVIARQ HGRAIYFQVL DFQRAEEGFE
HQDAMPEVKP PEEGLDLVDV MRRGGNAEAD ALGKEWGALD VRWLGNSRFG LEADPDRPSQ
ARMWVRLKEG LGDDPVVHLA AFTYASDVSL LGSTLAAHGV NPSKTQMASL DHTIWFHRPF
RADEWWLYDQ VSPAAVGARG LAFGRIFTQD GTLVATVAQE GLIRPRGEGY AGPGMA