Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2850 |
Symbol | |
ID | 4598449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3020188 |
End bp | 3021078 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777455 |
Product | palmitoyl-CoA hydrolase |
Protein accession | YP_924039 |
Protein GI | 119717074 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGGG GAGCGTCGGG CCCGACCGCG GAGCTGGTCG GGCTGCTCGA CCTGGAGCGG ATCGACGCCG ACCTGTTCCG CGGCGGGCAG CCGGACTCGG TCCGGGCCCG GGTCTACGGC GGCCAGGTCG CCGCCCAGGC GCTGGTCGCG GCGACCCGCA CCGTGGAACC GGCGTACGCC GTCCACTCGC TGCACTCCTA CTTCCTGCTG CCCGGCGACT ACTCGGTGCC GATCGTCTAC GACGTCGAGC GGATCCGCGA CGGGCGGTCC TTCCAGACGC GGCGGGTGAT CGCGCGCCAG CACGGGCGGG CGATCTACTT CCAGGTGCTG GACTTCCAGC GTGCCGAGGA GGGCTTCGAG CACCAGGACG CGATGCCCGA GGTGAAGCCG CCGGAGGAGG GCCTCGACCT GGTCGACGTC ATGCGTCGCG GCGGCAACGC CGAGGCGGAC GCCCTCGGCA AGGAGTGGGG CGCGCTCGAC GTGCGCTGGC TCGGCAACTC GCGGTTCGGT CTCGAGGCCG ACCCGGACCG CCCCTCCCAG GCCCGGATGT GGGTGCGGCT CAAGGAGGGG CTCGGCGACG ACCCGGTCGT CCACCTCGCG GCGTTCACCT ACGCCAGCGA CGTGAGCCTG CTCGGCTCGA CGCTCGCCGC GCACGGCGTG AACCCCTCGA AGACGCAGAT GGCGTCGCTG GACCACACGA TCTGGTTCCA CCGGCCGTTC CGCGCGGACG AGTGGTGGCT CTACGACCAG GTCTCGCCCG CGGCGGTGGG TGCCCGCGGG CTGGCCTTCG GCCGGATCTT CACCCAGGAC GGCACCCTGG TCGCCACGGT CGCGCAGGAG GGCCTGATCC GGCCCCGGGG CGAGGGGTAC GCCGGACCCG GCATGGCCTG A
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Protein sequence | MSGGASGPTA ELVGLLDLER IDADLFRGGQ PDSVRARVYG GQVAAQALVA ATRTVEPAYA VHSLHSYFLL PGDYSVPIVY DVERIRDGRS FQTRRVIARQ HGRAIYFQVL DFQRAEEGFE HQDAMPEVKP PEEGLDLVDV MRRGGNAEAD ALGKEWGALD VRWLGNSRFG LEADPDRPSQ ARMWVRLKEG LGDDPVVHLA AFTYASDVSL LGSTLAAHGV NPSKTQMASL DHTIWFHRPF RADEWWLYDQ VSPAAVGARG LAFGRIFTQD GTLVATVAQE GLIRPRGEGY AGPGMA
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