| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2824 |
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| Symbol | |
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| ID | 4596114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2993917 |
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| End bp | 2995227 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777429 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924013 |
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| Protein GI | 119717048 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTGA ACATCTACCA CGACAGCCCG CGGGAGCACC GTCGGCTGCT GGTGGCCGGT
GTCGCGTTCC TGGCGGTCAT CGCCCTGCTG ATCGCGCTGT CGATCGCGAT CTACCAGAAG
GTGTTCGAGC CGGCCACGAC CGTGACGATC CAGGCCGACC GGGCGGGCCT GCAGCTGGCG
AAGTTCGGGG ACGTCCGGCT GCACGGCGCC CTGGTCGGCC AGGTCCGCTC GGTGTCGCAG
GACGGTGACC AGGCGGTCAT CACGGTCGCC CTCCAGCCGG ACGAGGCGAA GCGGATCCCG
GAGAACGTGT CGGTGCAGAT CCTGCCGACG ACGCTGTTCG GCCAGAAGTT CATCTCGCTC
GTGACGCCCG CCGACCCGTC GCCGACGCCG CTCGCGGACG GCGACGTGAT CCCCGCCGAC
CGGGTCGAGA CGAACGTCGA GCTCAGCCGG ATCCTCGCGA ACCTGTTCCC GCTGCTGCGC
TCGGTCCGAC CGGCCGATCT CAACGCCACG CTGAATGCGC TCGCCACCGC CCTCGGCGGG
CGCGGCGAGC AGCTCGGCGA GACCATGGAC CGGCTCGACG ACTACCTCGG GGAGATCGAC
GACCACCTGC CGACGCTGCG CCAGGACCTG GTCAAGCTCG CCGACGTCGC CGACACCTAC
GACCTCGCCG CGCCCGACCT CCTCGGTGTG CTCCGCGACC TCACGACCAC CGGCCGGACC
GTGATCGACA ACAAGGCCCA GCTCGGCACC TTCTTCGCGG ACCTCCAGGG CCTGGCGGAC
ACGTCGACGC GGGTCCTGGA CGAGAACTCC ACCAACCTGA TCCGGGTCGG CCGGGTCACC
GAGCCGATGC TGCGCCTGCT GGCCGTGTAC TCGCCCGAGC TGCCCTGCCT GCTCGCGGGT
GCGGCCCGCT ACGCACCGCG GTTGGCCCGC ACCTTCGAGG GCAACCAGGT CAAGCAGTAC
ATCGAGTTCG GCACCGCCCA GTACCGCCCC TACGACGAGC GGGACCGGCC GACGTACGGC
GAGGTCGGCC ACGGACCCTG GTGCCTCGGC CTGCCGCACC CGAAGGTCCC GGCGCCGCCG
GTCGCGCTCG ACCAGGGCAG CGACATGGAC GAGCACCCGC CGGACAGCCC GCTGCCGACG
CAGCTCGGGC TGGGCCGGAT CGGCGCGGAC TACTCCGGCA CCGCGGGGGA GCGGCAGGTC
GTCAACGCGC TGATCGCCCA GCTCACCGGC CGGCCAGCGG ACAGCTACGG CTCCCTGGGC
TCGCTGCTCT ACGGCCCGGT CGTGAGCTCC CCCGCTGGAG GTGGGAGGTG A
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| Protein sequence | MLVNIYHDSP REHRRLLVAG VAFLAVIALL IALSIAIYQK VFEPATTVTI QADRAGLQLA
KFGDVRLHGA LVGQVRSVSQ DGDQAVITVA LQPDEAKRIP ENVSVQILPT TLFGQKFISL
VTPADPSPTP LADGDVIPAD RVETNVELSR ILANLFPLLR SVRPADLNAT LNALATALGG
RGEQLGETMD RLDDYLGEID DHLPTLRQDL VKLADVADTY DLAAPDLLGV LRDLTTTGRT
VIDNKAQLGT FFADLQGLAD TSTRVLDENS TNLIRVGRVT EPMLRLLAVY SPELPCLLAG
AARYAPRLAR TFEGNQVKQY IEFGTAQYRP YDERDRPTYG EVGHGPWCLG LPHPKVPAPP
VALDQGSDMD EHPPDSPLPT QLGLGRIGAD YSGTAGERQV VNALIAQLTG RPADSYGSLG
SLLYGPVVSS PAGGGR
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