Gene Noca_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2765 
Symbol 
ID4598799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp2936514 
End bp2937146 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID639777370 
Productregulatory protein, TetR 
Protein accessionYP_923954 
Protein GI119716989 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.267077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCC AGAAGTCCGT GCAGAAGTCC GCGCAGAAGA CGCCCGAGTC CGAGGCTCCG 
CACACCCGTC GTGCCCAGCT GCTGCAGATC GCCGCCGGTC TGTTCGCCGA GAAGGGCTTC 
AAGAACACCA CGGTGCGCGA CATCGCCGAC GCCGCCGGCA TCCTCTCGGG CAGCCTGTAC 
CACCACTTCG ACTCCAAGGA GTCGATGGTC GACGAGATCC TGCGCACCTT CCAGGAGGAG 
CTCTTCGGGC AGTACGACGA CATCCTCGGC GGCGACCTCG ACCCGCGGGC CAAGCTCGAG 
CAGGCCGTAC TCGTCTCCTT CGAGGCGATC GACAAGCACC GCGACGAGGT GGCGATCTTC 
CAGAACGAGG CGGCCTACCT GCTCACGTTC GACCGGTTCG CCTACCTCGC CGACCGCAAC 
CGGCAGTCCC AGCAGGTCTG GCTGACCCTG CTGCGCACCG GCGTCGACGC CGGGGTGCTG 
CGCGACGACC TCGACCTCGA GCTGACCTAC CGCTTCATCC GCGACACCGT CTGGGTCGCC 
GTGTCCTGGT ACCGGCCCGG CGGCCGGCGC ACGCACACCG AGATCGCGCG GCAGTACCTG 
TCCATCCTGC TCGAAGGGAT CGCCCGTGCC TGA
 
Protein sequence
MSAQKSVQKS AQKTPESEAP HTRRAQLLQI AAGLFAEKGF KNTTVRDIAD AAGILSGSLY 
HHFDSKESMV DEILRTFQEE LFGQYDDILG GDLDPRAKLE QAVLVSFEAI DKHRDEVAIF 
QNEAAYLLTF DRFAYLADRN RQSQQVWLTL LRTGVDAGVL RDDLDLELTY RFIRDTVWVA 
VSWYRPGGRR THTEIARQYL SILLEGIARA