| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2702 |
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| Symbol | |
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| ID | 4598353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2872086 |
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| End bp | 2874731 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639777308 |
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| Product | putative exonuclease |
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| Protein accession | YP_923892 |
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| Protein GI | 119716927 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0098926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTCC ACCACCTCGA GATCACCGCG TTCGGACCGT TCGCGGACAC CGTCGCGGTC
GACTTCGACG AGCTGTCCGG TGCCGGCCTG TTCCTGCTCT CCGGAGCGAC CGGCTCCGGC
AAGACCAGCG TCCTCGACGC CGTGTGCTTC GCCCTGTACG GCGACGTCCC CGGCGATCGC
AGCACCGCCA GGCGGCTCCG GTCCGACCAG GCCGCCCCCG GCGTCCGCCC GGAGGTGACA
CTGGAGGCGA CGCTGTCCGG CCGCCGGTTC CGGATCGTCC GCTCGCCGTC CTGGGAGCGG
CCCAAGAAGC GCGGCGCCGG CCTGACCACC GAGCAGGCGT CGGTCTCGAT CGCCGAGCGC
ATCGACGGCG GGTGGGTGAC CCACTCGACC CGGCTGGACG AGACCGGACA CCTGGTCACC
CGGCTGGTCG GTATGAACAC CGACCAGTTC ACCCAGGTCG CCATGCTCCC GCAGGGCCGG
TTCCAGGCGT TCCTCCGGGC CCGCTCCGAG GAGCGCCACC GGCTGCTCCA ACAGCTGTTC
CGAACCGGGC GGTTCGAGGG CGTCGAGCGC TGGCTGCGCG ACCGGCGGCT GGCCCTGGGC
CGCGAGGCCG AGGCGCTGCG CCGCCGCGTC GACGGGCTCG TCCACCGGGT CAGCGAGACC
ACCGGCACCC CCGCCCCCGA GGAGGGGACG GCCGACTGGG CGCACGCCTT GCTCGCCGAC
GCGTCCGCGC AGTGCGCAGA GACCGCGGCC GCCGCGCGCG CCGCCGCCGA GGCTGAGGCC
GAGGCGCGCG CGTCCTGGGA GGCGGCGCGC GTCCTGACCG AGCGCCGGGC CCGCCTCGAC
ACGGCCGCCG CCGAGCACCA GCGGCTGACC GCAGCCACCA GCGAGCAGGA GGCCGGCCGC
GACCGGCTGG ACGCGGCCCG GCGAGCGGCC GGCGTGGTGC CGCTGCACGC CCTCGCCGGG
AAGGCCCAGC GAGCCCACTC CGCAGCCCGG ACCGTGGTCG ACCGGCTCGA GGTCACCGAC
CGTGGGGCGC TCGAGGCCGC CGTCGCCGAG GCGGTCGACG GCGCCGCCCG GATGCGGGCC
CTGCAGCCGC GGGCGGCGCG CCTCCAACAG GTGCGCACCG AGACCGGGCG CCTCGAGCGG
CGTCAGCGGT CCCTCGCCGA AGAGGTGGCG GCCGCGCACG TCGCCGCCCG GGCCCTCGTG
CAGGCGCTGA CCGCCCAGGT CGCCGAGGCC CGGGAGGCCC ACGCCCGCTC CCGCTCGGAG
GCGCAGCGGC TGCGCGGCCA CGCGCTCGAC GTACGCGAGG CACGCCTGGA CGGGATGGTC
GCCGAGCTCG CCGGCGCCCT CGCCGTCGGG GCGTCCTGCC CGGTCTGCGG GTCCTGCGAC
CACCCGCACA AGGCCGCGAC CCGCGCCGGA GCCCCGGACG ATGCCGCCGA GAAGGCTGCC
CAGCGCGCGG CCGACGACGC CGCCGCGACC GAGCACCTGC GCGATGTCGA GGTCCGCGAC
CTGTCCGCCC GGCTCGACGC GGCGACCGAG CAGGTCGATC AGGTCCCCGC CGACCTGGTC
GCCCAGGTCG CCGCCGCCGA GACCGCGCTG GACCGGCTGG CGGCCGAGGC GTCGCGGCTC
GAGGCCGAGC TCGCCGACTA CGACGAGACC GTGGCCGCGG ACTTCGCCCG CCAGGAGCAG
GCCGGTCGCT CGGCGCTCGC CGCGCTGGAC GGCCTCGCCG CCGCCGGCAC GGCCCTCGAG
GACGCCCGGA CGGCGCTGGC CGCGGCCGTG GTCGACGCCG GGTTCGCGAG CGCCGACGAG
GCCGTCGCCG CGAGCCTCGA CCAGCGGACC TACGACCGCC TCGCGGCCGC CGTCGCCGAC
CACGACCGCC GGCTCGCGGC CGTCGCCGCC GTGCTCTCCG AGCCCGGCGC GGCCGAGGTC
GCAGCGGCCG TGCTCCCCGA CCTGGGCGGG CTGGAGAGCG GCCACCGCAC CACCCTCGAC
GCGCTGGGCG CGGCCCGTGC CCAGGAGTCG GCCTGGGCCA CCCGCGCCGG GCGCCTGTCC
GGCCTGGCCG CCGAGCTGGA CGCCGCGCTG ACCGCCTGGG AGCCGCTGCG TGACGAGCTC
GACCTGACCA CCCGCCTGTG CAGCTTCGTC GAAGGCAAGT CGGCCGACAA CCGACTCCAG
ATGCGGCTCT CCGCCTACGT CCTCGCCTAC CGGCTCTCCC AGGTCGTCAC CGCCGCGAAC
GCGCGGCTGG GCGCGATGAG CGACCAGCGC TACTCCCTGG AGCACACCGG CCGGCGCGGC
GCCGGCGAGA CCCGCGGCGG CCTGAGCCTG CTCGTGCGCG ACGACTGGTC CGGCGAGTCC
CGCGACCCCG CGACCCTGTC CGGTGGCGAG ACCTTCGTGG TCTCGCTCGC CCTGGCGCTG
GGGCTGGCCG ACGTCGTCAC CCAGGAGGCC GGCGGAGCCG ACCTCGACAC GCTCTTCGTC
GACGAGGGCT TCGGGTCGCT CGACGCCGAC ACCCTCGACG ACGTGATGGG CACCCTCGAC
TCGCTGCGCG ACGGCGGCCG CGTCGTCGGC GTCGTCAGCC ACGTCGCCGA GATGCGCGAC
CGGATCCCCG CCCAGCTGGT CGTCACCAAG TCGCGCACCG GGTCGACGCT GCGACTATCC
AGGTGA
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| Protein sequence | MRLHHLEITA FGPFADTVAV DFDELSGAGL FLLSGATGSG KTSVLDAVCF ALYGDVPGDR
STARRLRSDQ AAPGVRPEVT LEATLSGRRF RIVRSPSWER PKKRGAGLTT EQASVSIAER
IDGGWVTHST RLDETGHLVT RLVGMNTDQF TQVAMLPQGR FQAFLRARSE ERHRLLQQLF
RTGRFEGVER WLRDRRLALG REAEALRRRV DGLVHRVSET TGTPAPEEGT ADWAHALLAD
ASAQCAETAA AARAAAEAEA EARASWEAAR VLTERRARLD TAAAEHQRLT AATSEQEAGR
DRLDAARRAA GVVPLHALAG KAQRAHSAAR TVVDRLEVTD RGALEAAVAE AVDGAARMRA
LQPRAARLQQ VRTETGRLER RQRSLAEEVA AAHVAARALV QALTAQVAEA REAHARSRSE
AQRLRGHALD VREARLDGMV AELAGALAVG ASCPVCGSCD HPHKAATRAG APDDAAEKAA
QRAADDAAAT EHLRDVEVRD LSARLDAATE QVDQVPADLV AQVAAAETAL DRLAAEASRL
EAELADYDET VAADFARQEQ AGRSALAALD GLAAAGTALE DARTALAAAV VDAGFASADE
AVAASLDQRT YDRLAAAVAD HDRRLAAVAA VLSEPGAAEV AAAVLPDLGG LESGHRTTLD
ALGAARAQES AWATRAGRLS GLAAELDAAL TAWEPLRDEL DLTTRLCSFV EGKSADNRLQ
MRLSAYVLAY RLSQVVTAAN ARLGAMSDQR YSLEHTGRRG AGETRGGLSL LVRDDWSGES
RDPATLSGGE TFVVSLALAL GLADVVTQEA GGADLDTLFV DEGFGSLDAD TLDDVMGTLD
SLRDGGRVVG VVSHVAEMRD RIPAQLVVTK SRTGSTLRLS R
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