| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2690 |
|---|
| Symbol | |
|---|
| ID | 4598341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2858478 |
|---|
| End bp | 2859155 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639777296 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_923880 |
|---|
| Protein GI | 119716915 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0369259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCC GCTCCGCCGC CGCCGTAGCC TCGCTCGCCA CCGTCGCCCT GCTGCTCGGC
GGCTGCGGCT CCGACGACGG AGCCGACCAG AAGAGCGCCA CGGACGCCGG CGCGACGACG
AGCTGCACGT ACGCCGCCGA CGGCTCCGCC CCGGCCAAGG AGGTCGACCC GCCCGCCGAG
GACGCGCCCG CCTCCGGCAC CGTCGCGCTC ACGATGGCGA CCAGCGTCGG CGACCTCGGC
CTCACGCTGG ACGCGGCCGC GGCGCCCTGC ACCGTGAACT CGTTCGTGTC GCTGGCCGAG
CAGGGCTACT TCGACGACAC CTCCTGCCAC CGGCTGACCA CCCAGGGCAT CCACGTGCTC
CAGTGCGGGG ACCCGACCGG CACGGGCACC GGCGGGCCCG GCTACACGAT CCAGGACGAG
GTCGACGGGA GCGAGAGCTA CCCCGCCGGC ACCCTGGCGA TGGCCCGGAC CCAGGCCCCG
GACTCGGGCG GCTCGCAGTT CTTCATCGTG TACGGCGACA CCCCGCTCCC GCCGGACTAC
ACGGTGTTCG GCACGGTCGA CGACGCCGGG CTGAAGGCGA TCGAGAAGGT CGCCGGGGCC
GGCACCGACG AGGCCAATGG CCCGGGCGAC GGGCACCCGC TGACGCCGGT GGACATCCGG
TCCGTCACGG TCGGCTGA
|
|---|
| Protein sequence | MSLRSAAAVA SLATVALLLG GCGSDDGADQ KSATDAGATT SCTYAADGSA PAKEVDPPAE
DAPASGTVAL TMATSVGDLG LTLDAAAAPC TVNSFVSLAE QGYFDDTSCH RLTTQGIHVL
QCGDPTGTGT GGPGYTIQDE VDGSESYPAG TLAMARTQAP DSGGSQFFIV YGDTPLPPDY
TVFGTVDDAG LKAIEKVAGA GTDEANGPGD GHPLTPVDIR SVTVG
|
|---|
| |