Gene Noca_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2657 
Symbol 
ID4599936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2827012 
End bp2827704 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID639777263 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_923847 
Protein GI119716882 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.352219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGA TCGCAATCGT CGGCGGCCAC GGGCAGGTCG CGCGGCAGCT CGTCCACCTG 
CTCCGGCGCG CCGGCCACGA CCCGGTGGCC CTGGTGCGGA ACGAGGCCTA CCGCGAGGAG
CTGGAGGGCC GGGGTGCGGA GGTCCGGATG CTCGACATCG AGCGCCAGGG CGCGACCGAG
TTCGCGGCGG CCTTCGCCGG CTGCGAAGCC GTCGTGTTCG CGGCGGGTGG CGGGCCGGAC
GGCAACATCG AACGCAAGCG CACCGTGGAC CTCGAGGGCT CCCTGAAGTC GATCGAGGGC
GCCCGCGCGG CGGGGATCCG GCGCTTCGTC CAGGTGTCCG CGATCGGGGT CGACGACCCG
CTCCCGGCCG ACACCGGAGC GGTCTGGCGA GCCTATGTGG CGGCCAAGCG CGACGCCGAC
GCCGCGCTAC GCGCGAGCGA CCTGGACTGG ACGATCATCC GTCCCGGCCG GCTCACCGAC
GAGCCGGCCA CCGGGCGCGT CGCCCTCGGC GCGGACGTGG CCCGTGGTGA GGTCACCCGC
GCCGACGTCG CCGCCGTCCT GGCGGCCGTG TTCGACGTGC CGGGCAGCAT CGGGCAGCAG
TGGAACCTGG TGTCCGGCGA GGTCCCGGTC GAGCAGGCCG TGCACTCCCC CGACGGACGG
TCGGTTCACT CGTCGTCGGC GAGGGAGGAG TAG
 
Protein sequence
MTRIAIVGGH GQVARQLVHL LRRAGHDPVA LVRNEAYREE LEGRGAEVRM LDIERQGATE 
FAAAFAGCEA VVFAAGGGPD GNIERKRTVD LEGSLKSIEG ARAAGIRRFV QVSAIGVDDP
LPADTGAVWR AYVAAKRDAD AALRASDLDW TIIRPGRLTD EPATGRVALG ADVARGEVTR
ADVAAVLAAV FDVPGSIGQQ WNLVSGEVPV EQAVHSPDGR SVHSSSAREE