Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2616 |
Symbol | |
ID | 4596420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2783645 |
End bp | 2785351 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777221 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_923806 |
Protein GI | 119716841 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACCCG ATGAGCGTCC GTGGGCGAGC AGCTACGCGC CCGGCGTGCC GCTGGACATC GACGTCCCCG ACGAGTCGCT GGTCGACCTG CTGGAGGCGT CCGCGGCCCG GTTCGGGGCG CGCACCGCGC TCGACTTCTT CGGTGCGACC ACCACGTACG CCGGGCTCGG CGACCTGGTG GCCCGCGCGG CGGAGGGGCT GCGGCGCGTG GGCGTCGGAG CGGGCGACCG GGTGGCGCTG GTGCTGCCGA ACTGCCCCCA GCACGTGGTC GCGTTCTACG CCGCGCTGCG GCTGCGCGCG GTGGTGGTGG AGCACAACCC CCTCTACACC GAGGAGGAGA TGGCCTTCCA GCTCGCCGAC CACCGGCCGA CGGTCGTCGT CGCCTGGGAC AAGGTGGCGC CGATGGTGCG GCGGATCGTC GAGCCCCTCG GGGCTCCCAC CGTGCTGGCG GTCCACCTCC CGTCCGCCCT GCCGCGCCGC AAGCAGCTCG CGCTGCGGCT GCCCGTTCCG CGGGCCGCGC GCACCCGCGC CGCGCTGAGC GGACCCGCCC GCGGCATCCG CCGGTGGGAG AGCATCCTGC GCGGGCCGGC GCTGGCCGCG GACCACCCGC GGCCCACGAG CGCCGACGTC GCCCTTCTCC AGTACACCGG CGGCACGACC GGGCGACCCA AGGCCGCCGT ACTCACGCAC CGCAACTTGC GCGCGAACGC CGCCCAGGGC CGGGCCTGGA TGCCGGGGCT CGTGGACGGC GACGAGGTCG TCTACGCCGT GCTGCCCCTG TTCCACGCGT ACGGCCTGAC CCTCTGCTTG ACCTTCTCGA TGAGCATCGG CGCAACGCTC GTCCTGATGC CGCGCTTCGA CGTGGACCTG GTGCTGGAGG CGATGCGCCG GCGGCCGGCC ACCTTCCTGC CGGCGGTGCC GCCGGTCTAC CAGCGCCTGG CCGCCGCGGC CGCCGAGCAC GGCGTCGACC TGTCCTCGAT CCGCTATGCG ATCTCCGGAG CGATGTCGCT GCCGGCCGAG ACGGCCGAGC TGTGGGAGGC CGCGACGGGT GGACTGCTCG TCGAGGGGTA CGGCATGACG GAGACCTCGC CGGTCGCTCT CGGGAACCCC GCCGGTGACG CCCGCCGGAT CGGCGCGATC GGGGTGCCCT TTCCCTCCAC CGAGGTGCGC GTCGTGGACC GGCACGACCC CTCGCGCGAG CTGCCGGCCG GCCAGGCCGG CGAGCTGCTG CTGCGCGGGC CCCAGGTCTT CGCCGGCTAC TGGGAGCGCC CCGCCGAGAC CGCCGAGGTG GTGCTCGCCG ACGGCTGGAT CCGCACCGGT GACGTGGTGG TGATGTCCGA GGACGGCTTC TTCACCATCG TCGACCGGAT CAAGGAGCTG ATCATCACCG GCGGCTTCAA CGTCTACCCC AGCGAGGTGG AGCACGCGCT GCGCGAGCTC CCCGGGATCG TGGACGCCGC GGTCGTCGGC CTGCCCTCCG GGCGTGGGGA CGAGGACGTG GTCGCCGTCG TGGTGCTCGA GCCCGGCACC ACGCTCGACG AGGACGCGGT GCGGGCCGGG TGTCGCGAGC ACGTCGCGGC GTACAAGGTG CCGCGGCGGG TGTACGCCGT CGACGCGCTG CCGGTCTCCA TCATCGGCAA GGTGCTGCGC CGGCAGGTCC GCGACGAGCT CCAGGAGCGC TTCGAGGCCG CGCCGCCGGC AACGTGA
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Protein sequence | MRPDERPWAS SYAPGVPLDI DVPDESLVDL LEASAARFGA RTALDFFGAT TTYAGLGDLV ARAAEGLRRV GVGAGDRVAL VLPNCPQHVV AFYAALRLRA VVVEHNPLYT EEEMAFQLAD HRPTVVVAWD KVAPMVRRIV EPLGAPTVLA VHLPSALPRR KQLALRLPVP RAARTRAALS GPARGIRRWE SILRGPALAA DHPRPTSADV ALLQYTGGTT GRPKAAVLTH RNLRANAAQG RAWMPGLVDG DEVVYAVLPL FHAYGLTLCL TFSMSIGATL VLMPRFDVDL VLEAMRRRPA TFLPAVPPVY QRLAAAAAEH GVDLSSIRYA ISGAMSLPAE TAELWEAATG GLLVEGYGMT ETSPVALGNP AGDARRIGAI GVPFPSTEVR VVDRHDPSRE LPAGQAGELL LRGPQVFAGY WERPAETAEV VLADGWIRTG DVVVMSEDGF FTIVDRIKEL IITGGFNVYP SEVEHALREL PGIVDAAVVG LPSGRGDEDV VAVVVLEPGT TLDEDAVRAG CREHVAAYKV PRRVYAVDAL PVSIIGKVLR RQVRDELQER FEAAPPAT
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