| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2609 |
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| Symbol | |
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| ID | 4597157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2776113 |
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| End bp | 2777834 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639777215 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_923800 |
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| Protein GI | 119716835 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0501554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTC GCTACGACCA CCCCCGTGCC CACCGAGTGG CGGACGCCGT ACGCAGCCCC
GCGGCCGACG TCGTCCCCCA CCCCGCTCTC GACCAGCCGG TGGAGGCCGC CGCTCCCGAC
CGGGCCGGGT TGGACCGGGT CGTCTTCGGC GTGACGGCGG CCATCGCGGT CGCGTTCCTC
GTGTGGGGCT TCGTGAGCAC GTCCACCCTG GCCTCGGCGT CGTCCGACGC GCTCGGCTGG
ACGATGACCA ACACCGGGTG GCTGTTCGTC CTCACCGCGA GCGGGTTCGT GGTGTTCGTG
CTCTGGCTCG CGCTCAGCCG GTTCGGCAAC ATCCCGCTGG GTCGCGACGA CGAGGAGCCC
GAGTTCCGCA CCGTCTCGTG GGTCGCGATG ATGTTCAGCG CCGGGATGGG CATCGGATTG
ATGTTCTACG GGGTCAGCGA GCCGCTGACC CACTACGTCG CTCCGCCGCC CGGCACCGGC
GCCGAGGGCA ACCCGCAGGC CGTCCAGCAC GCGATGGCGA CGACGCTGTT CCACTGGACG
CTCCACCCGT GGGCGATCTA CGCGGTGGTC GGGCTCGCGA TCGCGTACGG CGTGTACCGC
AAGGGCCGGC TCCAGCTGAT CTCGGCGGCC TTCGAGCCGC TCCTGGGCCG CCACGCCAAG
GGAGGCTGGG GCCGGGTCAT CGACATGCTC GCCATCTTCG CCACGCTGTT CGGGTCCGCG
GCGTCGCTCG GCCTGGGGGC GCTCCAGATC CAGAGCGGCC TGGAGATCGT CGGTGGGCTC
GGCGAGGTCG GCAACGGTGT CCTGGTCGGC ATCATCACGG TGCTGACCGT CGCGTTCGTG
CTCTCCGCGG TCTCGGGTGT CGCGAAGGGC ATCCAGTGGC TCTCGAACAT CAACATGGTC
CTGGCGATCG CACTCGCGGC GTTCGTCTTC GTGCTGGGCC CGACCGTGTT CATCCTCAAC
CTGGTGCCGA CCTCGATCGG GAGCTTCGTC CAGGACCTGC CGATGATGGC CGCGCGCACC
AGCGCGGAGG GATCGGAGAC CAGCACCTGG CTGCAGTCCT GGACGGTCTT CTACTGGGCG
TGGTGGCTGT CCTGGACCCC GTTCGTCGGC ATGTTCATCG CCCGGATCTC CCGCGGTCGC
ACGATCCGGC AGTTCGTCAG CGGCGTGCTG CTGGTGCCGA GCCTGGTCAG CCTGGTGTGG
TTCTGCATCT TCGGGGGCGC CGCCATCGAC CTGCAGAGGT CGGGCACCGA CCTCGCCGGC
GCGAGCGGCG TCGAGTCGCA GCTCTTCGGG ACCCTCGAGG CCTATCCGCT CGCCACCGTC
GCCAGCATGG TCGTCATGCT GCTGGTCGCG ATCTTCTTCG TCTCCGGTGC GGACGCGGCG
TCGATCGTGA TGGGCACCCT CTCCGAACGC GGCACCCAGG AGCCCAGCCG GGCGACCGTG
GTCTTCTGGG GCGTCGCCAC CGGGGCGGTC GCCGCGGTGA TGCTGCTGGT CGGCGGCGAC
CAGGCACTCA CCGGCCTGCA GACGATCACC ATCGTCGCCG CGCTGCCGTT CGTCGTGGTG
ATGGTGGGGC TGGCCGTCGC GCTCGTGAGA GACCTGCGCA CGGACCCGTT GATGGTGCGC
CGCCGGTACG CCGCTGAGGC GGTCGAGCAG GCCGTCATCG CCGGCGTCAC CGAGCACGGC
GACGACTTCG TGCTGGCCGT GGACCGCGAC CCGCAGGCCT AG
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| Protein sequence | MTTRYDHPRA HRVADAVRSP AADVVPHPAL DQPVEAAAPD RAGLDRVVFG VTAAIAVAFL
VWGFVSTSTL ASASSDALGW TMTNTGWLFV LTASGFVVFV LWLALSRFGN IPLGRDDEEP
EFRTVSWVAM MFSAGMGIGL MFYGVSEPLT HYVAPPPGTG AEGNPQAVQH AMATTLFHWT
LHPWAIYAVV GLAIAYGVYR KGRLQLISAA FEPLLGRHAK GGWGRVIDML AIFATLFGSA
ASLGLGALQI QSGLEIVGGL GEVGNGVLVG IITVLTVAFV LSAVSGVAKG IQWLSNINMV
LAIALAAFVF VLGPTVFILN LVPTSIGSFV QDLPMMAART SAEGSETSTW LQSWTVFYWA
WWLSWTPFVG MFIARISRGR TIRQFVSGVL LVPSLVSLVW FCIFGGAAID LQRSGTDLAG
ASGVESQLFG TLEAYPLATV ASMVVMLLVA IFFVSGADAA SIVMGTLSER GTQEPSRATV
VFWGVATGAV AAVMLLVGGD QALTGLQTIT IVAALPFVVV MVGLAVALVR DLRTDPLMVR
RRYAAEAVEQ AVIAGVTEHG DDFVLAVDRD PQA
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