Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2602 |
Symbol | |
ID | 4597150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2767771 |
End bp | 2768370 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777208 |
Product | peptide deformylase |
Protein accession | YP_923793 |
Protein GI | 119716828 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.280121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC CCGACGACCA AGGACCGCCG CACGCCCCAC ACGGTCCGTT GCCGGAGGGC GGCACCGCGC GGTCGATCAC CCGCTGGGGG ACGCCGGTCA TGCACCGGGC GCAGCAGCCG GTCACGACGT ACGACGACGA GCTCCGCGCC CTGGCCGCCG ACATGGTCGC GACCATGTAC GCCGCGGACG GAGTCGGGCT CGCCGCCTGC CAGATCGGCG TCGACCTCGC GATGTTCGTC TTCGACTGTC CTGACGACTC CGGCGTCCAC ACGGTCGGCG TCGTGTGCAA CCCGCAGCTG ACCCTCCCGG AGGGCCGGGA CCGCCAGCTC GACGAGTCCG AGGAGGGCTG CCTCTCTTTC CCGGGCGCGC ATGTCGAGTG CGCCCGGCCC GACCAGGCCT CCGTCACCGG CACCGGACTG GACGGCGAGC CGGTCAGCTT CTCCGGCGAC GGACTGCTGG CGCGCTGCCT CCAGCACGAG ACCGACCACA CCCGGGGCAC GGTCTTCGGC GATCGGCTCT CCACCAAGCT GCGCAAACGG CTGCAGAAGG CGCACGACCG TGCGGTCGAG GACTACCCGC TGGAGTGGCC CGCAGGCTGA
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Protein sequence | MSSPDDQGPP HAPHGPLPEG GTARSITRWG TPVMHRAQQP VTTYDDELRA LAADMVATMY AADGVGLAAC QIGVDLAMFV FDCPDDSGVH TVGVVCNPQL TLPEGRDRQL DESEEGCLSF PGAHVECARP DQASVTGTGL DGEPVSFSGD GLLARCLQHE TDHTRGTVFG DRLSTKLRKR LQKAHDRAVE DYPLEWPAG
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