Gene Noca_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2545 
Symbol 
ID4598402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2715279 
End bp2716226 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content73% 
IMG OID639777151 
ProductABC transporter related 
Protein accessionYP_923736 
Protein GI119716771 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.107905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCGC CCGACCCCAC CGTTCCCGCG GTCTCGGTCG ACGGCCTGGA GATGCGCTAC 
GGCGACAAGG TGGCCGTCGA CGCGCTCTCG CTGAACGTGG AGCGGCACAC CATCACCGCC
GTCCTCGGCC CGAACGGGGC AGGGAAGACC ACGACGCTCG AGACCTGCGA GGGCTACCGC
CGCCCGCAGG CCGGCACAGT GCGGGTGCTC GGTCTGGACC CGATCCGCGA CCGGGCCGAG
CTGCTGCCCC GGATCGGCGT GATGCTCCAG GGCGGCGGTG CCTGGAGCGG CGTGCGGGCC
CGGGAGATGC TCGACCACGT CGCGAAGCTG CACGCCCACC CGCTGGACAC CGAGATGCTC
TCCGAACGCC TCGGCCTGGC CGACTGCGGG CGCACGCCCT ACCGCCGGCT CTCCGGCGGG
CAGCAGCAGC GCCTCGGCCT CGCGATGGCG CTGGTCGGCC GGCCTGAGGT CGTGTTCGTC
GACGAGCCCA CCGCGGGCAT GGACCCCCAG GCACGGCGCA CCACCTGGGA GCTGCTCGAG
GAGCTGCGCG GCGACGGCGT GACCGTGGTG CTCACCACCC ACTACATGGA CGAGGCCGAG
CGGCTCGCGG ACCGGATCCA CATCATCGAC CACGGCCGGC TGATCGCCTC CGGGACGCCG
CTCGAGCTGA CCCGCGGCGG CACCCACGCC ACGATCCGGC TGGTGGTGAC CAGGCCGTTC
CCCCCGGGCT CGCCGGACTC GCTGGCGCAC ACCCTCGGCG AGCACACCGA GGTCACCCAG
CTCGACGCTC TCAGCCTGAT GGTGACGGGC CCGGCCGACG CCTCCACGCT CGCCAAGGTC
TCGCGCTGGT GCGAGGAGAA CAACGTGCTC CCCGAGTCCC TCACGCTGGG ACAGCGCAAC
CTCGAGGACG TCTTCCTCCA GCTCACCGGA CGGGGGCTGG CGCCATGA
 
Protein sequence
MPAPDPTVPA VSVDGLEMRY GDKVAVDALS LNVERHTITA VLGPNGAGKT TTLETCEGYR 
RPQAGTVRVL GLDPIRDRAE LLPRIGVMLQ GGGAWSGVRA REMLDHVAKL HAHPLDTEML
SERLGLADCG RTPYRRLSGG QQQRLGLAMA LVGRPEVVFV DEPTAGMDPQ ARRTTWELLE
ELRGDGVTVV LTTHYMDEAE RLADRIHIID HGRLIASGTP LELTRGGTHA TIRLVVTRPF
PPGSPDSLAH TLGEHTEVTQ LDALSLMVTG PADASTLAKV SRWCEENNVL PESLTLGQRN
LEDVFLQLTG RGLAP