Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2545 |
Symbol | |
ID | 4598402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 2715279 |
End bp | 2716226 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639777151 |
Product | ABC transporter related |
Protein accession | YP_923736 |
Protein GI | 119716771 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.107905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGCGC CCGACCCCAC CGTTCCCGCG GTCTCGGTCG ACGGCCTGGA GATGCGCTAC GGCGACAAGG TGGCCGTCGA CGCGCTCTCG CTGAACGTGG AGCGGCACAC CATCACCGCC GTCCTCGGCC CGAACGGGGC AGGGAAGACC ACGACGCTCG AGACCTGCGA GGGCTACCGC CGCCCGCAGG CCGGCACAGT GCGGGTGCTC GGTCTGGACC CGATCCGCGA CCGGGCCGAG CTGCTGCCCC GGATCGGCGT GATGCTCCAG GGCGGCGGTG CCTGGAGCGG CGTGCGGGCC CGGGAGATGC TCGACCACGT CGCGAAGCTG CACGCCCACC CGCTGGACAC CGAGATGCTC TCCGAACGCC TCGGCCTGGC CGACTGCGGG CGCACGCCCT ACCGCCGGCT CTCCGGCGGG CAGCAGCAGC GCCTCGGCCT CGCGATGGCG CTGGTCGGCC GGCCTGAGGT CGTGTTCGTC GACGAGCCCA CCGCGGGCAT GGACCCCCAG GCACGGCGCA CCACCTGGGA GCTGCTCGAG GAGCTGCGCG GCGACGGCGT GACCGTGGTG CTCACCACCC ACTACATGGA CGAGGCCGAG CGGCTCGCGG ACCGGATCCA CATCATCGAC CACGGCCGGC TGATCGCCTC CGGGACGCCG CTCGAGCTGA CCCGCGGCGG CACCCACGCC ACGATCCGGC TGGTGGTGAC CAGGCCGTTC CCCCCGGGCT CGCCGGACTC GCTGGCGCAC ACCCTCGGCG AGCACACCGA GGTCACCCAG CTCGACGCTC TCAGCCTGAT GGTGACGGGC CCGGCCGACG CCTCCACGCT CGCCAAGGTC TCGCGCTGGT GCGAGGAGAA CAACGTGCTC CCCGAGTCCC TCACGCTGGG ACAGCGCAAC CTCGAGGACG TCTTCCTCCA GCTCACCGGA CGGGGGCTGG CGCCATGA
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Protein sequence | MPAPDPTVPA VSVDGLEMRY GDKVAVDALS LNVERHTITA VLGPNGAGKT TTLETCEGYR RPQAGTVRVL GLDPIRDRAE LLPRIGVMLQ GGGAWSGVRA REMLDHVAKL HAHPLDTEML SERLGLADCG RTPYRRLSGG QQQRLGLAMA LVGRPEVVFV DEPTAGMDPQ ARRTTWELLE ELRGDGVTVV LTTHYMDEAE RLADRIHIID HGRLIASGTP LELTRGGTHA TIRLVVTRPF PPGSPDSLAH TLGEHTEVTQ LDALSLMVTG PADASTLAKV SRWCEENNVL PESLTLGQRN LEDVFLQLTG RGLAP
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