| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2507 |
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| Symbol | |
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| ID | 4597838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2674572 |
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| End bp | 2675333 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777113 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_923698 |
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| Protein GI | 119716733 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.024976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC TGCTCGATTT CACCGGCAAG GTCGTCCTGA TCACGGGAGG CGCGACCGGC
ATCGGGCGGG CCACGGCGCT GGCCTTCGCC CAGCAGGGCG CGCGGGTCGT CGTCGGAGAC
GTCGACGACC GGGCGGCCGA GACCGTCCGC CTGATCGAGG AGTCGGGGGG CACGGCCCTG
TTCGTCCGCA CCGACGTCAC CTCAGCGGCC GACGTCCAGC AGCTGGTCCG CACCACGGTC
GACACCTACG GCGGGCTGCA CGTGGCGTTC AACAACGCCG GCATCCTGCC GCCCACCGGG
CCCCTCGCCG AGCAGAGCGA GGACGACTTC GACCGGACCA TCGCCGTCGA CCTCAAGGGC
GTGTTCCTCG CGCTCAAGTA CGAGATCGAG CACATGGCCG CCGCCGGCGG TGGCTCCATC
ATCAACACGG CCTCGGTCGC GGGCGTGATC GCCGACCCCG GCATGGCACC GTACGTCGCC
GCCAAGCACG GCGTCGTCGG GCTCACCCGC GCGGCCGCGA TCGACTACGC CGCGGCCGGC
GTCCGGGTGA ACGCCCTGGC GCCCGGCCTG GTCGACACGC CGATGACCAA GGTCTGGCAG
GAGGACGCCG AGATCTGGGA CGCGGTGGCC GCGAGCAACG GCTTCCACCG GGCGGCCGCG
CCGGAGGAGA TCGCCGGCAC CGTCCTGTTC CTGGCCAGTG ACCTGGCGTC GTTCACCACC
GGGACCGTCG TGACGGCCGA CGCGGGCCAG ACCGCGCACT GA
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| Protein sequence | MSELLDFTGK VVLITGGATG IGRATALAFA QQGARVVVGD VDDRAAETVR LIEESGGTAL
FVRTDVTSAA DVQQLVRTTV DTYGGLHVAF NNAGILPPTG PLAEQSEDDF DRTIAVDLKG
VFLALKYEIE HMAAAGGGSI INTASVAGVI ADPGMAPYVA AKHGVVGLTR AAAIDYAAAG
VRVNALAPGL VDTPMTKVWQ EDAEIWDAVA ASNGFHRAAA PEEIAGTVLF LASDLASFTT
GTVVTADAGQ TAH
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