| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2497 |
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| Symbol | |
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| ID | 4597122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2665992 |
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| End bp | 2666747 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777102 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_923688 |
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| Protein GI | 119716723 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACCC CGGGCATCGA GTCCGACGAC GACGGCCTGG TCCGGCTGCA GAAGCTGCTC
GCCCAGTCCG GCGTCGCGTC GCGGCGCAAG TGCGAGGAGC TGATGCTCGA GGGGCACGTC
GTCGTCGACG GCGAGGTCGT CACCCGGCTC GGCACCAAGG TCGACCCGCG GACCGCGGTG
ATCCGGGTCG ACGGCAAGCG GCTGCCACCG GTGTCGGAGA AGGTCTACCT GGTGCTGAAC
AAGCCCCGCG GTGTGGTGTC CACGATGTCG GACCCGGAGG GACGGCGCAC GCTGTCCGAC
CTCGTCGCCG ATCGCCCGGA GCGGCTCTTC CACGTCGGTC GTCTCGACAC CGACACGTCG
GGGCTGCTGC TCCTGACCAA CGACGGCGAC TTCGCGCACC GGATGGCGCA TCCCTCCTAC
GAGGTCGACA AGACCTACGT CGCAGAGGTC GAGGGCGAGG TCTACCGACG CACAATCAAG
CAGCTGCTCG AAGGGGTGAC CCTCGACGAC GGGCCGGTCA CGGTCTCGAA GGCGCGGATC
GTCGAGGCGA CGGCGGCGAA GTCGATCGTC GAGCTGGTCA TCCACGAGGG CCGCAACCGG
ATCGTGCGCC GGCTGCTCGA CCAGGTCGGG CACCCCGTGC GTCGCCTCAC CCGCACCGCG
ATCGGGCCGG TCTCCCTCGG CCGGCTGCCC AGCGGGGAGC TGCGGGACCT GACCCGCCAG
GAGCTCGGCG AGCTGCTGGA CACCGCCCAG CTGTAG
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| Protein sequence | MTTPGIESDD DGLVRLQKLL AQSGVASRRK CEELMLEGHV VVDGEVVTRL GTKVDPRTAV
IRVDGKRLPP VSEKVYLVLN KPRGVVSTMS DPEGRRTLSD LVADRPERLF HVGRLDTDTS
GLLLLTNDGD FAHRMAHPSY EVDKTYVAEV EGEVYRRTIK QLLEGVTLDD GPVTVSKARI
VEATAAKSIV ELVIHEGRNR IVRRLLDQVG HPVRRLTRTA IGPVSLGRLP SGELRDLTRQ
ELGELLDTAQ L
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