Gene Noca_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2489 
Symbol 
ID4597114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2657331 
End bp2658287 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content75% 
IMG OID639777094 
Producttyrosine recombinase XerD 
Protein accessionYP_923680 
Protein GI119716715 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACC CAGCGTCGAA CGACGTCGCG CGCGCGGTCC GGACCTACCT CGACCACCTG 
ACGGTCGAGC GCGGCCTCGC GACGAACACG CTGACGTCGT ATCGGCGCGA CCTGCGGCGC
TACCAGGAGT ACCTCGCCGA GTGCGGCGTG GAGCACCTGG CCGACGTCAC GGAGGGCACG
GTGGCGGCGT TCCTGGTGCG GCTGAGGGAA GGCGACCGGG ACCACCCGGC GCTGAGCGCC
ACCTCCGCCG CGCGGACCGT GGTGGCCGTG CGCGGCTTCC ACCGGTTCGC GGTCGCGGAC
GGCCTCGCCG CGACCGACCC GGCGAGCGCG GTGAAGCCGC CGACACCGGC CAAGCGGCTG
CCGAAGGCCC TGCCGCTCGC CGACGTCGAG GCGATCCTGG AGGCGGCGGG CGCTCCCGGC
ACCACCCTCG CGCTGCGGGA CCGGGCGCTG CTGGAGGTCC TCTACGGCAC CGGCGCCCGG
ATCTCGGAGG CCGTGGGCCT GGACGTGGAC GACCTCGACT GGGGAGAGTC CGGGGTCGAG
GGGACCGTCC TGCTGCGCGG CAAGGGCGGC AAGGAGCGGC TGGTCCCGGT CGGCTCCTAC
GCCCGGGAGG CGGTCGACGC CTACCTCGTG CGCGGTCGTC CGGAGCTGGT GGCCGCCTCG
GCGCGCGTCA CCGGGGGCGC GTTGTTCCTC AATGCGCGCG GTGGCCGGCT CTCGCGGCAG
TCGGCCTGGG CGGTGCTGGT GCGGGCGGCC GAGCGGGCCG GCGTCACCCG GGACGTGTCG
CCGCACACGC TGCGACACTC CTTCGCCACC CACCTGCTCG ACGGTGGGGC CGACGTCCGC
GTCGTGCAGG AGCTGCTCGG CCACGCGTCG GTGACCACCA CCCAGGTCTA TACCCTCGTG
ACGGTGGACA ACCTGCGCGA GGTTTTCGCC ACCGCCCATC CGCGCGCTCG CGACTGA
 
Protein sequence
MNDPASNDVA RAVRTYLDHL TVERGLATNT LTSYRRDLRR YQEYLAECGV EHLADVTEGT 
VAAFLVRLRE GDRDHPALSA TSAARTVVAV RGFHRFAVAD GLAATDPASA VKPPTPAKRL
PKALPLADVE AILEAAGAPG TTLALRDRAL LEVLYGTGAR ISEAVGLDVD DLDWGESGVE
GTVLLRGKGG KERLVPVGSY AREAVDAYLV RGRPELVAAS ARVTGGALFL NARGGRLSRQ
SAWAVLVRAA ERAGVTRDVS PHTLRHSFAT HLLDGGADVR VVQELLGHAS VTTTQVYTLV
TVDNLREVFA TAHPRARD