Gene Noca_2462 details

Gene Information

• Locus tag: Noca_2462
• ID: 4599803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2620178
• End bp: 2620891
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639777064
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_923653
• Protein GI: 119716688
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0566] rRNA methylases

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGAACCG AGCGGCGGCT CTTCCTTGCC GACGGCCCGA AGGCCGTCGA GGGTGCCCTC 
GCCGCCGACG TGGTCGTCGA GCTCTTCGCG ACGCCGGCGG CAGCGGAGCA GTACGCCGAC 
CTGCTCGGTG GCTTCCCGGC GGCGTTGGTC GACGACGGCG CCATGGCGGG GCTCTCCGAC 
AGCGTGACCC CGGCGGGTCT GGTGGCCGTG TGCCGGTTCC TCGACGACGA GCCCGTGGTC 
GACGCCCGGG TGTCGCGGTT GTTGGCGATC TGCGCCGACG TACGCGATCC CGGCAACGCC 
GGCACGGTCA TCCGCTGCGC CGATGCGGTC GGCGGCGACG GCGTCGTGCT CGCCGGGAAC 
TCGGTCGACC CCTACAACCC CAAGACGGTC CGCGCCAGCG TCGGCAGCCT GTTCCACGTG 
CGGATCGGGC AGGAGCGGCA CCCCGCGACG GCGGTGTCGC ACGCCCGCTC CGCCGGCTTC 
ACGGTGCTCG CCGCCGACGG CGCGGGAGAC GTCGATCTCT TCGACGCCGA CGAGTTGCTG 
GCGGGTCCGT CCGCCTGGCT GTTCGGCAAC GAGGCCTGGG GCCTCCCCGA GGAGCTCGCG 
GCGTTGGCCG ACCACCGGGT GCGGATCCCG ATCTACGGCC GCGCCGAGAG CCTCAACCTG 
TCCACCGCGG CGGCACTCTG CCTTTACGCC TCGGCCCGGG TCCAGCGTCG GTAA 

 

Protein sequence

MRTERRLFLA DGPKAVEGAL AADVVVELFA TPAAAEQYAD LLGGFPAALV DDGAMAGLSD 
SVTPAGLVAV CRFLDDEPVV DARVSRLLAI CADVRDPGNA GTVIRCADAV GGDGVVLAGN 
SVDPYNPKTV RASVGSLFHV RIGQERHPAT AVSHARSAGF TVLAADGAGD VDLFDADELL 
AGPSAWLFGN EAWGLPEELA ALADHRVRIP IYGRAESLNL STAAALCLYA SARVQRR