| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2383 |
|---|
| Symbol | |
|---|
| ID | 4599483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2538629 |
|---|
| End bp | 2539408 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639776986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_923575 |
|---|
| Protein GI | 119716610 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGCC ACTCCAAGTG GGCGACCACC AAGCACAAGA AGGCGGCGAT CGACGCCAAG
CGCGGCAAGC TGTTCGCCAA GCTGATCAAG AACATCGAGA TCGCAGCCAA GATGGGCGGC
CCCGACCCGG CCGGCAACCC GACCCTCTAC GACGCCATCC AGAAGGCCAA GAAGCAGTCG
GTCCCGAACA AGAACATCGA CTCCGCGGTC AAGCGCGGCG GTGGCCTCGA GAGCGGCGGC
GTCGACTACG AGACGATCAT GTACGAGGCC TACGGACCGC AGGGCGTGGC GCTGCTCGTC
GAGTGCCTCA CCGACAACCG CAACCGCGCG GCGATGGAGG TCCGCACCGC GGTCACCCGC
AACGGCGGCA CGATGGCCGA CCCCGGCTCG GTCTCGCGGC TGTTCACCCG CAAGGGCGTC
GTGGTGGTCG AGAAGGAGCA GGAGCGCGGC GGCAAGCCCT GGGAGATCAG CGAGGACGAC
ATCCTCGAGG CGACCCTCGA TGCGGGCGCG GAGGAGGTCG ACGACCTCGG GGAGAGCTTC
GAGATCCAGT CGGAGGCCTC CGACGTCGTC GCGGTGCGTA CGGCGCTGCA GGCCGCGGGC
ATCGACTACG ACTCCGCCGA GGTGCAGTTC GTGGCCACCC TCGACATCCC GGTGGCCGAG
ACCGACGTCG CGGGCAAGGT GTTCCGCCTG ATCGACGCGG TCGACGACCT GGACGACGTC
CAGAACGTGT TCACCAACGC CGACATCCCC GACGACGTCC TGGACTCCAT CGACGCGTAG
|
|---|
| Protein sequence | MSGHSKWATT KHKKAAIDAK RGKLFAKLIK NIEIAAKMGG PDPAGNPTLY DAIQKAKKQS
VPNKNIDSAV KRGGGLESGG VDYETIMYEA YGPQGVALLV ECLTDNRNRA AMEVRTAVTR
NGGTMADPGS VSRLFTRKGV VVVEKEQERG GKPWEISEDD ILEATLDAGA EEVDDLGESF
EIQSEASDVV AVRTALQAAG IDYDSAEVQF VATLDIPVAE TDVAGKVFRL IDAVDDLDDV
QNVFTNADIP DDVLDSIDA
|
|---|
| |