Gene Noca_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2360 
Symbol 
ID4595975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2516220 
End bp2517425 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID639776959 
Productpyruvate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_923552 
Protein GI119716587 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.799164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGC AGCTCGAAGG CTCCCGCGCG GTCGCCACGG CGGTGGCTCG CTGCCGGCCC 
GCCGTGATCG CGGCGTACCC CATCTCGCCG CAGACCCACA TCGTCGAGGC GCTCTCCGAC
TTCGTCCGCA CCGGTGAGCT GCGCGGGTGC GAGTACCTCA TGGTCGAGTC GGAGTTCGGG
GCCATGTCGG CGTGCATCGG TGCCTCCGGC GTCGGGGCGC GGACCTACAC CGCGACCGCG
AGCCAGGGCC TGTTGTTCAT GGCCGAGGCG CTCTTCAACG CCTCGGGCCT CGGGCTGCCG
ATCGTGATGA CGGTCGCGAA CCGGGCGATC GGCTCGCCGA TCAACATCTG GAACGACCAG
TCCGACTCGA TGTCGCAGCG CGATGCGGGC TGGGTGCAGC TGTTCGCGGT CTCCAACCAG
GAGGCCGTCG ACCTGCACCT GCAGGCGTTC GTCCTCGCCG AGCGCCTGTC GCTGCCGGTG
ATGGTGTGCA TGGACGGCTT CGTGCTCACC CACGCGGTGG AGGCCATCGA CGTGCCGGAG
CAGGCCCAGG TCGACGCGTT CCTGCCCCCG TTCGTGCCAC GCCAGCACCT GGACCCGAGC
GACCCGATCA CGATCGGCTC GATGGTCGGC CCGGAGGCGT TCACCGAGGT CCGCTACCTC
ATGCACGACC AGCAGCTCGC GGCCCTCGAC GAGCTGCCCC GGATCCAGCG GGACTTCCAC
GCGGAGTTCG GCCGGGACAC CGGCGGCCTG GTGCGGCCCT ACCGCACCGA GGACGCCGAC
GTCGTCGTGG TGGCGCTCGG CTCGGTGCTC GGGGGCGTCA ACGAGGTCGT CGACGCGCTC
CGCGAGGACG GCATCGCTGC CGGCTCGCTC GGCATCACCT GCTTCCGGCC CTGGCCGCTC
GACGCCGTGC GCGAGGCGCT CGGATCGGCG CGCCAGGTGG TCGTGGTCGA GCGCGCCTTC
TCCCCCGGCG TCGGCGGCAT CGTCGGACGG GACGTCCGGC TGGCCCTGCG CGGGACCGTC
GGCGGCGGCC CGGCGGTGTA CGACGTCGTG GCCGGCCTCG GCGGACGCCC GGTGACCCGC
GGCTCGCTGC GCCGGCTCGT CGACGACGTC CTCGCGGAGC GGCTCGACCC ACGCGGCCTG
CACTTCCTGG ACCTCGACCA TGACCTGCTC GCGCGGGCCG GTACCCCCTG GAGGAGGACG
TCGTGA
 
Protein sequence
MFEQLEGSRA VATAVARCRP AVIAAYPISP QTHIVEALSD FVRTGELRGC EYLMVESEFG 
AMSACIGASG VGARTYTATA SQGLLFMAEA LFNASGLGLP IVMTVANRAI GSPINIWNDQ
SDSMSQRDAG WVQLFAVSNQ EAVDLHLQAF VLAERLSLPV MVCMDGFVLT HAVEAIDVPE
QAQVDAFLPP FVPRQHLDPS DPITIGSMVG PEAFTEVRYL MHDQQLAALD ELPRIQRDFH
AEFGRDTGGL VRPYRTEDAD VVVVALGSVL GGVNEVVDAL REDGIAAGSL GITCFRPWPL
DAVREALGSA RQVVVVERAF SPGVGGIVGR DVRLALRGTV GGGPAVYDVV AGLGGRPVTR
GSLRRLVDDV LAERLDPRGL HFLDLDHDLL ARAGTPWRRT S