| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2244 |
|---|
| Symbol | |
|---|
| ID | 4597790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2392442 |
|---|
| End bp | 2395588 |
|---|
| Gene Length | 3147 bp |
|---|
| Protein Length | 1048 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639776843 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_923436 |
|---|
| Protein GI | 119716471 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TGCTGCTCGC GGGACTGCCC GTCCTGATCA TCTTCATGGG GCTGCCGTTC
CTCGTGACGC TGATGGTGGT GATGACGACC ACCGCGGCCG CCGAGTGCCG CACCCAGAGC
AGCCAAGGCA CCGCGCCTAC CGAGCTCGGT GACCTCGGAG CCATCGACGG CCCGGTGGGC
GGCCCGGTCA ACGGCAACAT CACCATGGCG CAGGCCAACA TCCCGCGCCG CTCCGGCCTC
GACGGGTTCC GGGCCTCCAT GCCCAAGGTC CTGTCCAAGA ACCCCGAGTT CGTCACCCTC
AACGAGGCCA GCGGCTGGAG CCTGGAGCAG ATCGAAGCCG CCGCCCCGGG CTACTCAGCC
TTCCGGGTGG CAGCCCCGGC CGGCACCGGC ACCGGCCCCG AGCAGGCCAT GGGCAACGTC
GTGCTCTGGA AGAGCTCGAC CTGGACGAAG GTCAACGGCG GCCGGGTCCA GCTCGTCGAC
GACGACAAGA CCTTCTACGA CGGGCGTCCG GTCACGTGGG ACCGCTTCGC GACATGGGTC
ATGCTGCGCC GCGCCGACGG CTCCGTGGTC TCGGTGGTCT CCACCCACCA CATGACCAAC
CCGCACCGTT GGCCGAAGCA GCACGGCAAC CCGCCGCTGA CCCGGCCCCA GCAGTACGGC
GCCGGAATGG ACATCCTGCT GCAGCTGCGC AACTCGCTGG CCGCCCACGG TCCGGTGCTG
ATCGGCGGCG ACATGAACAC CCAGGCCTCC TACACCGACA TCCCCTGGAC GGCGGCCGCG
AAGATGAAGG CCGCCGGCTA CGGATGGCAC AACCACGGCG TCGACTTCAT CTTCTTCCCG
CACCACCAGG GCGCCCGGCT CGAACAGGGC TGGGACGGCA CGATGGTTTC GGACCACCAC
TGGCTCTCGG CTCGCATCGC GATGAACGGC GCCGGCCCGG AGAGCGCGCC CGAGACCACC
ACCACGACTG ACGGGGTCGT GCCCGCGGCG ACCACCGCCC CGACGTCCGC CGAGCCGCCG
GCCGGCGACG TGCTCGCCCA GCTGATGCGG CTACGGTTCG CGTCCAACTA CCCGACCATG
ACCGACGAGC AGGCCCGCAA CGCGATCACC ATCGCCCAGG TCGCCCGCAA TCTCGAGATT
CCCCGCTACG GGCTGCAGAT CGCGATCGCC GCCGCGATCC AGGAGTCCAA GCTGGTCAAC
CTCACCGGAG GTGACCGCGA CTCCGGCGGC CTGTTCCAGC AGCGCCCCTC GGCCGGCTGG
GGAAGCCGGG CCGAGATCAC CAACGCCGTC CTCGCGGCCC GCGCGTTCTT CGGCCAGGCC
CAGCACACCG GCAACCCCGG GCTCCTCGAC ATCCCCGGCT GGCAGAACAT GCCGCTCACC
CAGGCCGCGC AGGCCGTCCA GCGCTCGGGC TACCCCGACG CCTACGCCCA GTGGGAGGAC
GTCGCCGGCG ACATCACCGA TCTGCTCGGC GGCGACCTGC CGGACCTGCC CGACGACGGC
TCCACCACGA ACGTCGCCAA CTGCCAGGGC GAGACCGTCA ACCCCATCAC CGTCGGCACC
CTCAACCTGC TCGGCGCCGG CCACACCGAC AAGCCGGGGG AGCGGGCCGG GTACGACACC
TGGGACAAGC GACTGCCCGG CGCCATGCGC ACGATCGAGA ACGCCGGCGT CACGATCACC
GGCCTCCAGG AGGTGCATGG CCCGCAGGCC CAGGCGCTGG AGAACCAGTA CGCGGCCAAG
TGGGGGATGT ACCCGGCCAG CGGGAAGGCA CAGAACCGGG TGATCTGGGA CCGCAACGAG
TGGGAGCAGA CCGACGGGCG CCTCGTCGGC ATCCCGTACT TCGGCGGGAA GGACGTCGGC
ATGCCGCTGG TGCAGCTGAC CTCGACGACC ACCGGGCAGG TGATCTGGGT CTGGAGCATC
CACAACCCGG CCAACACTCA AGGAAGCGCC GCCGGGCACC GCCAGGAGGC GCTGCGTCGC
CAGCTGGCCA CGATGACCGA GCTCGCCGGC ACCGGCACCC CTGCGGTGAT ACTGGGCGAC
TTCAACGACG GCAAGGACGG CAGCAACGCC TCGCACTGCG CACTGACCCC TGAGCTGAGC
AACGCCTTCG GCGGCTCTGC CGAGCCCTGC AAGAAGCCCA AGCAGGACGC GCCGATCGAC
CACGTCTACG GCGCGAACCT CACCTGGGCC GGCGCCGAGG TCGACACCAG CACCCAGGCC
AGCAAGATCG CCGACCACCC GCTGGTGACC GCCACCACCG CCGGCAGCAG CGCCGGGTGC
GCCGTCGACT CCGGTACAGC GGAGGCCAAG TACAACCTCG GCCCGGTCAA GCCGCAGCTG
ACCCAGCTGG TCAACATCCT CGGCCCCATG TTCGACATCA AGACCGTCGG CGGCTACCGC
GAGAGCGCCA CCGACCCCAA CGGCCACCCG GCCGGGCTCG CGGCCGATTT CATGGTGCCG
CTCAACGCGG CGGGCCGCGC GCAGGGCGAT CGTCTCGCCG CCTACGCCAA GGCCAATGCC
CAGAAGCTCG GCATCGACTA CATCATCTGG TACCAGCGGA TCTGGTCGGT CGCCCGCGTC
GGCGAGGGCT GGCGGCCGAT GGAGGACCGG GGGAGCGCTA CCGAGAACCA CCTCGACCAT
GTCCACATCA ACGTCAAGCC CGGCGCCTCC GTCCAGCCGG TCGGCCTCGA GGGCGCGTCC
TGCGACGAGG TCGTCTATCC GGTGCCCGCG CAGTACGTCG GAACCGACAA CCACAACTGG
CACGAGACCG GCGCGTACTG GTCCAAGTGG CACACCGGCA CCGACTTCTC CGCACCCTGC
GGAACCACCG TCTACGCTGC CCACGCCGGC ACCATCGAGA TCGACACCAC CCAGCGTTCC
TGGGCTGGGC CGCAGCTGGT CAAGGTCACC ACCGGCGCCG GGTCCCTGAC CACGTGGTAC
GCCCACATGG CGACCGTCAG CGTCAGCCGT GGCCAGACCG TCGCCGCCGG CGAGCCGATC
GGCCAGGTCG GCAAGGAGGG CAACGTCTCC GGCTGCCACC TCCACTTCGA GGTCCACCTC
AAGAACGGCT CCATCTACGG CCCCGACAAC GTCGATCCCT CGACCTGGCT CGCAGAGAAC
GCATCACGCC CGAGCCGCGC CGTGTGA
|
|---|
| Protein sequence | MKKLLLAGLP VLIIFMGLPF LVTLMVVMTT TAAAECRTQS SQGTAPTELG DLGAIDGPVG
GPVNGNITMA QANIPRRSGL DGFRASMPKV LSKNPEFVTL NEASGWSLEQ IEAAAPGYSA
FRVAAPAGTG TGPEQAMGNV VLWKSSTWTK VNGGRVQLVD DDKTFYDGRP VTWDRFATWV
MLRRADGSVV SVVSTHHMTN PHRWPKQHGN PPLTRPQQYG AGMDILLQLR NSLAAHGPVL
IGGDMNTQAS YTDIPWTAAA KMKAAGYGWH NHGVDFIFFP HHQGARLEQG WDGTMVSDHH
WLSARIAMNG AGPESAPETT TTTDGVVPAA TTAPTSAEPP AGDVLAQLMR LRFASNYPTM
TDEQARNAIT IAQVARNLEI PRYGLQIAIA AAIQESKLVN LTGGDRDSGG LFQQRPSAGW
GSRAEITNAV LAARAFFGQA QHTGNPGLLD IPGWQNMPLT QAAQAVQRSG YPDAYAQWED
VAGDITDLLG GDLPDLPDDG STTNVANCQG ETVNPITVGT LNLLGAGHTD KPGERAGYDT
WDKRLPGAMR TIENAGVTIT GLQEVHGPQA QALENQYAAK WGMYPASGKA QNRVIWDRNE
WEQTDGRLVG IPYFGGKDVG MPLVQLTSTT TGQVIWVWSI HNPANTQGSA AGHRQEALRR
QLATMTELAG TGTPAVILGD FNDGKDGSNA SHCALTPELS NAFGGSAEPC KKPKQDAPID
HVYGANLTWA GAEVDTSTQA SKIADHPLVT ATTAGSSAGC AVDSGTAEAK YNLGPVKPQL
TQLVNILGPM FDIKTVGGYR ESATDPNGHP AGLAADFMVP LNAAGRAQGD RLAAYAKANA
QKLGIDYIIW YQRIWSVARV GEGWRPMEDR GSATENHLDH VHINVKPGAS VQPVGLEGAS
CDEVVYPVPA QYVGTDNHNW HETGAYWSKW HTGTDFSAPC GTTVYAAHAG TIEIDTTQRS
WAGPQLVKVT TGAGSLTTWY AHMATVSVSR GQTVAAGEPI GQVGKEGNVS GCHLHFEVHL
KNGSIYGPDN VDPSTWLAEN ASRPSRAV
|
|---|
| |