| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2242 |
|---|
| Symbol | |
|---|
| ID | 4597788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2389370 |
|---|
| End bp | 2390875 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639776841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_923434 |
|---|
| Protein GI | 119716469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT ACGCCGACTA CCAGCGCGAC CGTATCGGCT GGTTCTTCGG CCTCTCCGGA
GGCCAGCTGA TGTTCCTGGC GCTGGCCAGC CTGCCGGCGT TCTGGGCGAT CAGCCGCGGA
GCGTGGTTCT CCGCGTTTCT GTTCGCCCTG GTCTGGGTGT TCCTCCTGGC CATCACCGTG
ATCCCGGTGC GCGGCCGCTC GGCCACCGGC TGGGTGTTCG CCTCGACCAT GTACGCCGTC
GGCGGCCTGT TCGGCTGGAC CTCGTTCCGC GCCAAGGCCA CACAGGGCCG CGGCGACGAC
CTCGACACCC CGGACCTGCC CGGGGTCCTC CAGGGCGTCC AGATCCACGA CGGCCCGCCG
CACGGCTCGC AGCTGCAGCG CGTAGCGATC ATCGAGGACC ACGCCATGAA GACCTGGGCG
GTCACGGCCT CGATCGTGCA CCCCGGCATC GGCATGAAGG ACACCGAAGA GCGAGCCCGC
TACGGCGAGG CGCTGGCCGG GCTGCTCGAC GTCGCCGGTC GCACCGAGAA GGTCGACGAG
ATCCTCTTCA TGGTGCGCAC CGTCCCCGAG GACGGCGCCG AGCGCGACCT GTGGGCAAAC
CGCCACCGCC GCCCCAACGC CCCGGAGCTG TCGGAGGTCG TCAACAGCGA CCTGGCCCAC
GGCCTCACCC AGGCATCGGT GCGCACCGAG CAGTTCGTGA CGATCCTGGT CCCGGAGACC
CGGATCGCGA GGTCGGCCAA AGAGTCCGGG GGCGGCTTCG AGGGCCGCTG CCGCGAGCTC
TACCTGCTCA TGGCCGAGAT CGAGGCCCAG CTGCGCGGCC CGATGGGGAT GACCACGGTG
CGCTGGCTCA CCAGCCCCGA GCTCGCACTG GCCTGCCGGA CCGGATTCGC CCCCGGCGAC
CGCGCCGGCA TCGTCGAGGC CCTCTCGCTG CGGGAGAAGG ACCCGAGCGT CAACGCCGAC
GTCCCGTGGG CGATGGCCGG CCCCTCGGGT GCCGACGCCA CAGTGCGGCA CTACAGCCAC
GACGCCTGGA ACTCGGTCAG CGCCACCATC AAGCTGCCGA CCCGCGGCGT CGCGATGGGT
GCCCTGGCAC CGATCCTCAC CCCCAGCGAG TTCGGTGAGC GGCGATCGTT CGTCGTCGCG
TACCCGATCG TGTCCCAGAC CAAGGCCGAC CGGCAGTCCG GCAACGCCGA GTGGGCCGCC
GACCTGGCCG AGGGGATGAA CGAGAAGCTC GGCCGCAAGA CCCGCGCCAA GCAGCGCGAC
GAAGCCCACA AGGCCCGCGG CCTGGACGCC AAGCTGGCCC GCGGCAACTC GCTGACCCGG
CCCTACGGCG TGTGCACGGT CACCGTCCCC AAGTCGATGC GGATCACCGA GTTCGGGCGC
CGCCTGGACG CCTCGGTCCG ACGCGCCGGG TTCGCACCGC TGCGCCTCGA CCTCGCCCAG
GACGTCGGGT TCGCCGCGTC CACCATCCCC CTCGGCTCGA GCCTGACCCG GAGCGGAGAC
GCCTGA
|
|---|
| Protein sequence | MTTYADYQRD RIGWFFGLSG GQLMFLALAS LPAFWAISRG AWFSAFLFAL VWVFLLAITV
IPVRGRSATG WVFASTMYAV GGLFGWTSFR AKATQGRGDD LDTPDLPGVL QGVQIHDGPP
HGSQLQRVAI IEDHAMKTWA VTASIVHPGI GMKDTEERAR YGEALAGLLD VAGRTEKVDE
ILFMVRTVPE DGAERDLWAN RHRRPNAPEL SEVVNSDLAH GLTQASVRTE QFVTILVPET
RIARSAKESG GGFEGRCREL YLLMAEIEAQ LRGPMGMTTV RWLTSPELAL ACRTGFAPGD
RAGIVEALSL REKDPSVNAD VPWAMAGPSG ADATVRHYSH DAWNSVSATI KLPTRGVAMG
ALAPILTPSE FGERRSFVVA YPIVSQTKAD RQSGNAEWAA DLAEGMNEKL GRKTRAKQRD
EAHKARGLDA KLARGNSLTR PYGVCTVTVP KSMRITEFGR RLDASVRRAG FAPLRLDLAQ
DVGFAASTIP LGSSLTRSGD A
|
|---|
| |